HHsearch alignment for GI: peg_472 and conserved domain: PRK06090
>PRK06090 DNA polymerase III subunit delta'; Validated.
Probab=100.00 E-value=0 Score=416.54 Aligned_cols=302 Identities=17% Similarity=0.252 Sum_probs=241.7
Q ss_pred HHHHHHHHHHHHHCCCCCEEEHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCC
Q ss_conf 48999999999982876706201078798888999999999614687778866587899977999977987782224533
Q 537021.9.peg.4 4 QKPMIKTLTNAFKSGRIAQSYMLSGTRGIGKTTTARIIARSLNYKTAHIDVPTVEFEGFGEHCQAIIRGNHVDVVELDAA 83 (369)
Q Consensus 4 q~~~~~~l~~~~~~~~~~ha~lf~G~~G~GK~~~a~~~A~~l~c~~~~~~~~~~~~c~~c~~c~~i~~~~~~d~~e~~~~ 83 (369)
T Consensus 8 l~~~~~~l~~~~~~~rl~HA~L~~g~~G~Gk~~la~~la~~LlC~~~~~-----~~Cg~C~sC~l~~~g~HPD~~~i~pe 82 (319)
T PRK06090 8 LVPVWQNWKSGLDAERIPGALLLQSDEGLGVESLVELFSHALLCQNYQS-----EACGFCHSCELMKSGNHPDLHVIKPE 82 (319)
T ss_pred CHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCC-----CCCCCCHHHHHHHCCCCCCCEEEECC
T ss_conf 3799999999998699630676679998579999999999980899999-----98877877999875899982366123
Q ss_pred ---CCCCHHHHHHHHHHHHHHHHCCCCCEEEEECHHHCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHH
Q ss_conf ---22334555665554456542046523775115664800167899999721221114665067543303567543332
Q 537021.9.peg.4 84 ---SHTSIDDVREIIDQIYYKPISARFRVYIMDEVQMLSTAAFNGLLKTLEEPPPHVKFIFATTEIRKIPITVLSRCQRF 160 (369)
Q Consensus 84 ---s~~~id~ir~l~~~~~~~p~~~~~kv~iid~a~~m~~~a~NaLLK~lEEPp~~~~fil~t~~~~~ll~TI~SRcq~~ 160 (369)
T Consensus 83 ~~~k~I~vd~IR~l~~~~~~~~~~g~~KV~iI~~ae~m~~~AaNALLKtLEEPp~~t~fiL~t~~~~~ll~TI~SRCq~~ 162 (319)
T PRK06090 83 KEGKSITVEQIRQCNRLAQESSQLGGYRLFVIEPADAMNESASNALLKTLEEPAPNCLFLLVTHNQKRLLPTIVSRCQQW 162 (319)
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCHHHCCHHHHHHHHHHHCCCCCCEEEEEEECCHHHCCCCHHHCCCCC
T ss_conf 35676879999999999754521069369998144434999999999984289988389987685120864187614450
Q ss_pred HCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHCCCCHHHHHHCCCCCCHHHHHHHH
Q ss_conf 10245400135678764310134562566445653167642001100011100000012103220001356777778888
Q 537021.9.peg.4 161 DLHRISIGDLIELFTKILQEESIEFDPEAVAMIARASDGSARDGLSLLDQAIARCNDKIVTSSVRLMLALADRNRIMDLF 240 (369)
Q Consensus 161 ~f~~l~~~~i~~~L~~i~~~E~i~~d~~~l~~ia~~s~GslR~Al~lLeq~i~~~~~~i~~e~v~~llg~~~~~~i~~Ll 240 (369)
T Consensus 163 ~l~~p~~~~~~~WL~~----q~~~~~~----~aL~l~~g~Pl~a~~~l~~~------~~--~~---------~~~l~~~l 217 (319)
T PRK06090 163 VVTPPSTDQAMQWLKG----QGISVPA----YALKLNMGSPLKTLAMMKEG------EL--EE---------YHKLERQL 217 (319)
T ss_pred CCCCCCHHHHHHHHHH----HCCCCHH----HHHHHCCCCCHHHHHHHCCC------HH--HH---------HHHHHHHH
T ss_conf 2899599999999988----4875579----99988499949999986386------89--99---------99999999
Q ss_pred HHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHH
Q ss_conf 76301363346788765430476213578777534899999974574122344998899999999862998999999999
Q 537021.9.peg.4 241 GYLIKGDIINVLQEFSSQYDSGVNPSVILHDLAEFTHLVTRIKYIPEMADTLLYSEAENARALQYSKEVSITFLSRFWQM 320 (369)
Q Consensus 241 ~ai~~~d~~~al~~l~~l~~~g~d~~~iL~~Ll~~~rdll~~k~~~~~~~~~~~~~~e~~~i~~~a~~i~~~~L~~~lq~ 320 (369)
T Consensus 218 ~~~~~~~~~~~~~~~~~~-~--~~~~~~L~Wl~~lL~Da~K~~~gi--------~~~~~~~~~~~l~~l~~~~L~~~~~~ 286 (319)
T PRK06090 218 VDALSGPVSDVLKCASLI-A--ADPLTALSWLWLLLTDAQKAHFGV--------QNEYILPGSAALGPFTYSGLYASTAK 286 (319)
T ss_pred HHHHHCCCCHHHHHHHHH-C--CCHHHHHHHHHHHHHHHHHHHHCC--------CCCHHHHHHHHHHHCCHHHHHHHHHH
T ss_conf 999847884199998873-6--057778999999999999998605--------21066667999984189999999999
Q ss_pred HHHHHHHHHC--CCCHHHHHHHHHHHHH
Q ss_conf 9999998302--7888999999999995
Q 537021.9.peg.4 321 ILKGISEIEG--FSRPMEAVEMVLIRLA 346 (369)
Q Consensus 321 l~~a~~~Lk~--n~np~L~lE~lLlkL~ 346 (369)
T Consensus 287 l~~~r~qL~~~~~lN~ELll~~~Ll~~~ 314 (319)
T PRK06090 287 LLELKEQLQQFSGLNTELLIMNWLIESR 314 (319)
T ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHHH
T ss_conf 9999999971887269999999999987