HHsearch alignment for GI: peg_472 and conserved domain: PRK07452
>PRK07452 DNA polymerase III subunit delta; Validated.
Probab=99.93 E-value=1.7e-23 Score=193.38 Aligned_cols=304 Identities=14% Similarity=0.157 Sum_probs=239.0
Q ss_pred CCEEEHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 67062010787988889999999996146877788665878999779999779877822245332233455566555445
Q 537021.9.peg.4 20 IAQSYMLSGTRGIGKTTTARIIARSLNYKTAHIDVPTVEFEGFGEHCQAIIRGNHVDVVELDAASHTSIDDVREIIDQIY 99 (369)
Q Consensus 20 ~~ha~lf~G~~G~GK~~~a~~~A~~l~c~~~~~~~~~~~~c~~c~~c~~i~~~~~~d~~e~~~~s~~~id~ir~l~~~~~ 99 (369)
T Consensus 1 ~P-vYll~GeE~~li~~~~~~i~~~~~~~~~----------------------~~fn~~~~dg~---e~~~~~~~l~~a~ 54 (326)
T PRK07452 1 MP-IYLYWGEDDFALNQAIEKLIDQVVDPEW----------------------KSFNYSRLDGD---DAEQAIQALNEAM 54 (326)
T ss_pred CC-EEEEEECCHHHHHHHHHHHHHHCCCCCC----------------------CCCCEEEECCC---CCCHHHHHHHHHC
T ss_conf 98-8999838289999999999996089544----------------------67623787375---5425999999862
Q ss_pred HHHHCCCCCEEEEECHHHCCC---CHHHHHHHHHHHCCCCCCEEEEECC-CC---CCCHHHHHHHHHHHCCCC---CCHH
Q ss_conf 654204652377511566480---0167899999721221114665067-54---330356754333210245---4001
Q 537021.9.peg.4 100 YKPISARFRVYIMDEVQMLST---AAFNGLLKTLEEPPPHVKFIFATTE-IR---KIPITVLSRCQRFDLHRI---SIGD 169 (369)
Q Consensus 100 ~~p~~~~~kv~iid~a~~m~~---~a~NaLLK~lEEPp~~~~fil~t~~-~~---~ll~TI~SRcq~~~f~~l---~~~~ 169 (369)
T Consensus 55 T~Pf~~~~RlVvvk~a~~~~~~~~~~~~~l~~~l~~~p~~t~lv~~~~~k~D~R~K~~K~l~k~~~~~ef~~~~~~~~~~ 134 (326)
T PRK07452 55 TPPFGSGGRLVWLKNSPLCQGCSEELLAELERTLPLIPENTHLLLTNTKKPDGRLKSTKLLQKLAEEKEFSLPPPWDGEG 134 (326)
T ss_pred CCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHEEEEEECCCCCCCHHH
T ss_conf 78877885599983661002487889999999861799975999984676323778789998401134540688657999
Q ss_pred HHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHCCCCCCCHHH-C--CCCHHHHHHCCCCCCHHHHHHHHHHHHCC
Q ss_conf 35678764310134562566445653167642001100011100000-0--12103220001356777778888763013
Q 537021.9.peg.4 170 LIELFTKILQEESIEFDPEAVAMIARASDGSARDGLSLLDQAIARCN-D--KIVTSSVRLMLALADRNRIMDLFGYLIKG 246 (369)
Q Consensus 170 i~~~L~~i~~~E~i~~d~~~l~~ia~~s~GslR~Al~lLeq~i~~~~-~--~i~~e~v~~llg~~~~~~i~~Ll~ai~~~ 246 (369)
T Consensus 135 l~~wi~~~~~~~g~~i~~~a~~~Lv~~~G~dl~~l~~EleKL~ly~~~~~~~It~e~V~~lv~~-~~~~iF~L~dAi~~~ 213 (326)
T PRK07452 135 QKQLVERTAQELGVKLTPEAAELLAEAVGNDSRRLYNELEKLALYAENSEKPISAEDVKALVSN-TTQNSLQLADALLQG 213 (326)
T ss_pred HHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCC-CCCCHHHHHHHHHCC
T ss_conf 9999999999869998999999999986843999999999999862899970689999988277-644099999999868
Q ss_pred CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCC--------CCCCC-CHHHHHHHHHHHHHCCHHHHHHH
Q ss_conf 6334678876543047621357877753489999997457412--------23449-98899999999862998999999
Q 537021.9.peg.4 247 DIINVLQEFSSQYDSGVNPSVILHDLAEFTHLVTRIKYIPEMA--------DTLLY-SEAENARALQYSKEVSITFLSRF 317 (369)
Q Consensus 247 d~~~al~~l~~l~~~g~d~~~iL~~Ll~~~rdll~~k~~~~~~--------~~~~~-~~~e~~~i~~~a~~i~~~~L~~~ 317 (369)
T Consensus 214 ~~~~Al~~l~~Ll~~ge~pi~Ila~l~~q~r~ll~vk~l~~~G~~~~~~ia~~lgi~~P~r~~~~~~~~~~~s~~~L~~~ 293 (326)
T PRK07452 214 NTGEALALIDDLLDANEPALRIVATLTGQFRTWLWVKLLVESGERDVKVIAKAAGIGNPKRIYFLRKEVQGLSSQQLLKL 293 (326)
T ss_pred CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHH
T ss_conf 99999999999998799889999999999999999999997489779999998289982789999999867999999999
Q ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
Q ss_conf 999999999830278889999999999953304
Q 537021.9.peg.4 318 WQMILKGISEIEGFSRPMEAVEMVLIRLAHAVQ 350 (369)
Q Consensus 318 lq~l~~a~~~Lk~n~np~L~lE~lLlkL~~~~~ 350 (369)
T Consensus 294 l~~l~~~D~~iKsG~~~~~ale~~v~~lc~~~~ 326 (326)
T PRK07452 294 LPLLLDLEASLKQGANPINAFQDKLIELCQLLQ 326 (326)
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
T ss_conf 999999999864799868999999999960439