HHsearch alignment for GI: peg_472 and conserved domain: PRK07452

>PRK07452 DNA polymerase III subunit delta; Validated.
Probab=99.93  E-value=1.7e-23  Score=193.38  Aligned_cols=304  Identities=14%  Similarity=0.157  Sum_probs=239.0

Q ss_pred             CCEEEHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf             67062010787988889999999996146877788665878999779999779877822245332233455566555445
Q 537021.9.peg.4   20 IAQSYMLSGTRGIGKTTTARIIARSLNYKTAHIDVPTVEFEGFGEHCQAIIRGNHVDVVELDAASHTSIDDVREIIDQIY   99 (369)
Q Consensus        20 ~~ha~lf~G~~G~GK~~~a~~~A~~l~c~~~~~~~~~~~~c~~c~~c~~i~~~~~~d~~e~~~~s~~~id~ir~l~~~~~   99 (369)
T Consensus         1 ~P-vYll~GeE~~li~~~~~~i~~~~~~~~~----------------------~~fn~~~~dg~---e~~~~~~~l~~a~   54 (326)
T PRK07452          1 MP-IYLYWGEDDFALNQAIEKLIDQVVDPEW----------------------KSFNYSRLDGD---DAEQAIQALNEAM   54 (326)
T ss_pred             CC-EEEEEECCHHHHHHHHHHHHHHCCCCCC----------------------CCCCEEEECCC---CCCHHHHHHHHHC
T ss_conf             98-8999838289999999999996089544----------------------67623787375---5425999999862


Q ss_pred             HHHHCCCCCEEEEECHHHCCC---CHHHHHHHHHHHCCCCCCEEEEECC-CC---CCCHHHHHHHHHHHCCCC---CCHH
Q ss_conf             654204652377511566480---0167899999721221114665067-54---330356754333210245---4001
Q 537021.9.peg.4  100 YKPISARFRVYIMDEVQMLST---AAFNGLLKTLEEPPPHVKFIFATTE-IR---KIPITVLSRCQRFDLHRI---SIGD  169 (369)
Q Consensus       100 ~~p~~~~~kv~iid~a~~m~~---~a~NaLLK~lEEPp~~~~fil~t~~-~~---~ll~TI~SRcq~~~f~~l---~~~~  169 (369)
T Consensus        55 T~Pf~~~~RlVvvk~a~~~~~~~~~~~~~l~~~l~~~p~~t~lv~~~~~k~D~R~K~~K~l~k~~~~~ef~~~~~~~~~~  134 (326)
T PRK07452         55 TPPFGSGGRLVWLKNSPLCQGCSEELLAELERTLPLIPENTHLLLTNTKKPDGRLKSTKLLQKLAEEKEFSLPPPWDGEG  134 (326)
T ss_pred             CCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHEEEEEECCCCCCCHHH
T ss_conf             78877885599983661002487889999999861799975999984676323778789998401134540688657999


Q ss_pred             HHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHCCCCCCCHHH-C--CCCHHHHHHCCCCCCHHHHHHHHHHHHCC
Q ss_conf             35678764310134562566445653167642001100011100000-0--12103220001356777778888763013
Q 537021.9.peg.4  170 LIELFTKILQEESIEFDPEAVAMIARASDGSARDGLSLLDQAIARCN-D--KIVTSSVRLMLALADRNRIMDLFGYLIKG  246 (369)
Q Consensus       170 i~~~L~~i~~~E~i~~d~~~l~~ia~~s~GslR~Al~lLeq~i~~~~-~--~i~~e~v~~llg~~~~~~i~~Ll~ai~~~  246 (369)
T Consensus       135 l~~wi~~~~~~~g~~i~~~a~~~Lv~~~G~dl~~l~~EleKL~ly~~~~~~~It~e~V~~lv~~-~~~~iF~L~dAi~~~  213 (326)
T PRK07452        135 QKQLVERTAQELGVKLTPEAAELLAEAVGNDSRRLYNELEKLALYAENSEKPISAEDVKALVSN-TTQNSLQLADALLQG  213 (326)
T ss_pred             HHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCC-CCCCHHHHHHHHHCC
T ss_conf             9999999999869998999999999986843999999999999862899970689999988277-644099999999868


Q ss_pred             CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCC--------CCCCC-CHHHHHHHHHHHHHCCHHHHHHH
Q ss_conf             6334678876543047621357877753489999997457412--------23449-98899999999862998999999
Q 537021.9.peg.4  247 DIINVLQEFSSQYDSGVNPSVILHDLAEFTHLVTRIKYIPEMA--------DTLLY-SEAENARALQYSKEVSITFLSRF  317 (369)
Q Consensus       247 d~~~al~~l~~l~~~g~d~~~iL~~Ll~~~rdll~~k~~~~~~--------~~~~~-~~~e~~~i~~~a~~i~~~~L~~~  317 (369)
T Consensus       214 ~~~~Al~~l~~Ll~~ge~pi~Ila~l~~q~r~ll~vk~l~~~G~~~~~~ia~~lgi~~P~r~~~~~~~~~~~s~~~L~~~  293 (326)
T PRK07452        214 NTGEALALIDDLLDANEPALRIVATLTGQFRTWLWVKLLVESGERDVKVIAKAAGIGNPKRIYFLRKEVQGLSSQQLLKL  293 (326)
T ss_pred             CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHH
T ss_conf             99999999999998799889999999999999999999997489779999998289982789999999867999999999


Q ss_pred             HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
Q ss_conf             999999999830278889999999999953304
Q 537021.9.peg.4  318 WQMILKGISEIEGFSRPMEAVEMVLIRLAHAVQ  350 (369)
Q Consensus       318 lq~l~~a~~~Lk~n~np~L~lE~lLlkL~~~~~  350 (369)
T Consensus       294 l~~l~~~D~~iKsG~~~~~ale~~v~~lc~~~~  326 (326)
T PRK07452        294 LPLLLDLEASLKQGANPINAFQDKLIELCQLLQ  326 (326)
T ss_pred             HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
T ss_conf             999999999864799868999999999960439