HHsearch alignment for GI: peg_472 and conserved domain: PRK08903

Probab=98.94  E-value=1.4e-08  Score=83.51  Aligned_cols=192  Identities=17%  Similarity=0.212  Sum_probs=129.5

Q ss_pred             CCC-HHHHHHHHHHHHHCCCCCEEEHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCC
Q ss_conf             928-4899999999998287670620107879888899999999961468777886658789997799997798778222
Q 537021.9.peg.4    1 MIG-QKPMIKTLTNAFKSGRIAQSYMLSGTRGIGKTTTARIIARSLNYKTAHIDVPTVEFEGFGEHCQAIIRGNHVDVVE   79 (369)
Q Consensus         1 iiG-q~~~~~~l~~~~~~~~~~ha~lf~G~~G~GK~~~a~~~A~~l~c~~~~~~~~~~~~c~~c~~c~~i~~~~~~d~~e   79 (369)
T Consensus        21 v~g~n~~~~~~l~~~~~~~~~~~~l~i~G~~G~GKTHLl~a~~~~~~~~-------------------------~~~~~y   75 (227)
T PRK08903         21 IAGENAELVTRLRELAAGPVADRFFYLWGEAGSGRSHLLQALVAAASEG-------------------------GKNARY   75 (227)
T ss_pred             CCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHC-------------------------CCCEEE
T ss_conf             5777599999999887438878669998999998889999999999806-------------------------997499


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECHHHCCCCHHHHHHHHHHHCCC--CCCEEEEECCC-C--CCCHHHH
Q ss_conf             45332233455566555445654204652377511566480016789999972122--11146650675-4--3303567
Q 537021.9.peg.4   80 LDAASHTSIDDVREIIDQIYYKPISARFRVYIMDEVQMLSTAAFNGLLKTLEEPPP--HVKFIFATTEI-R--KIPITVL  154 (369)
Q Consensus        80 ~~~~s~~~id~ir~l~~~~~~~p~~~~~kv~iid~a~~m~~~a~NaLLK~lEEPp~--~~~fil~t~~~-~--~ll~TI~  154 (369)
T Consensus        76 l~~~~~------~~~~~---~---~~~~d~l~iDDi~~i~~~~q~~lF~l~N~~~~~~~~~ll~s~~~~p~~l~~~~DL~  143 (227)
T PRK08903         76 LDPASP------LLAFD---F---DPRAELYAVDDVERLDDAQQIALFNLFNRVRAHGKTALLVAGPAAPLALDVREDLR  143 (227)
T ss_pred             ECCCCC------HHHHH---H---HHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHCCCCHHHH
T ss_conf             651104------57774---2---00189899964114895699999999999997299489971899712012008999


Q ss_pred             HHH---HHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHCCCCCCCH---HHCCCCHHHHHHCC
Q ss_conf             543---332102454001356787643101345625664456531676420011000111000---00012103220001
Q 537021.9.peg.4  155 SRC---QRFDLHRISIGDLIELFTKILQEESIEFDPEAVAMIARASDGSARDGLSLLDQAIAR---CNDKIVTSSVRLML  228 (369)
Q Consensus       155 SRc---q~~~f~~l~~~~i~~~L~~i~~~E~i~~d~~~l~~ia~~s~GslR~Al~lLeq~i~~---~~~~i~~e~v~~ll  228 (369)
T Consensus       144 SRl~~gl~~~i~~pdde~~~~iL~~~a~~rgl~l~~~v~~yl~~r~~R~~~~L~~~l~~Ld~~sl~~kr~iTi~lvkevL  223 (227)
T PRK08903        144 TRLGWGLVYEVKPLSDEDKIAALKAAAAERGLQLADEVPDYLLTHFRRDMPSLMALLDALDRYSLEQKRAVTLPLLREML  223 (227)
T ss_pred             HHHHCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
T ss_conf             99938973899797999999999999996299998899999999834789999999999999999829999999999985


Q ss_pred             C
Q ss_conf             3
Q 537021.9.peg.4  229 A  229 (369)
Q Consensus       229 g  229 (369)
T Consensus       224 a  224 (227)
T PRK08903        224 A  224 (227)
T ss_pred             C
T ss_conf             5