HHsearch alignment for GI: peg_472 and conserved domain: PRK09862
>PRK09862 putative ATP-dependent protease; Provisional.
Probab=97.93 E-value=7.6e-05 Score=55.88 Aligned_cols=149 Identities=18% Similarity=0.262 Sum_probs=77.9
Q ss_pred CCCHHHHHHHHHHHHHCCCCCEEEHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHH--CCCCCC--
Q ss_conf 9284899999999998287670620107879888899999999961468777886658789997799997--798778--
Q 537021.9.peg.4 1 MIGQKPMIKTLTNAFKSGRIAQSYMLSGTRGIGKTTTARIIARSLNYKTAHIDVPTVEFEGFGEHCQAII--RGNHVD-- 76 (369)
Q Consensus 1 iiGq~~~~~~l~~~~~~~~~~ha~lf~G~~G~GK~~~a~~~A~~l~c~~~~~~~~~~~~c~~c~~c~~i~--~~~~~d-- 76 (369)
T Consensus 193 v~Gq~~akraleIAAAGg---HnlLl~GpPG~GKTMlA~rlp~ILPpLt~~----------e~lEv~~I~Svag~~~~~~ 259 (506)
T PRK09862 193 VVGQEQGKRGLEITAAGG---HNLLLIGPPGTGKTMLASRINGLLPDLSNE----------EALESAAILSLVNAESVQK 259 (506)
T ss_pred HCCCHHHHHHHHHHHCCC---CCEEEECCCCCCHHHHHHHHHHCCCCCCHH----------HHHHHHHHHHHHCCCCCCC
T ss_conf 369799999999974468---865987699945989997751238998989----------9999999998718987777
Q ss_pred CCCCCC--CCCCCHHHHHHHH--------HHHHHHHHCCCCCEEEEECHHHCCCCHHHHHHHHHHH-------------C
Q ss_conf 222453--3223345556655--------5445654204652377511566480016789999972-------------1
Q 537021.9.peg.4 77 VVELDA--ASHTSIDDVREII--------DQIYYKPISARFRVYIMDEVQMLSTAAFNGLLKTLEE-------------P 133 (369)
Q Consensus 77 ~~e~~~--~s~~~id~ir~l~--------~~~~~~p~~~~~kv~iid~a~~m~~~a~NaLLK~lEE-------------P 133 (369)
T Consensus 260 ~~~~rPfR~PHHs~S-~~aliGGG~~~~PGEISL----AH~GVLFLDElpEF~r~vLe~LRqPLE~g~I~IsRa~~~~~~ 334 (506)
T PRK09862 260 QWRQRPFRSPHHSAS-LTAMVGGGAIPGPGEISL----AHNGVLFLDELPEFERRTLDALREPIESGQIHLSRTRAKITY 334 (506)
T ss_pred CCCCCCEECCCCCCC-HHHHHCCCCCCCCCCEEE----CCCCEEEECCHHCCCHHHHHHHHHHHCCCEEEEEECCCEEEE
T ss_conf 546685037887654-766637999999972221----357578845500068889998776224775999966867986
Q ss_pred CCCCCEEEEECCC---CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHH
Q ss_conf 2211146650675---4330356754333210245400135678764
Q 537021.9.peg.4 134 PPHVKFIFATTEI---RKIPITVLSRCQRFDLHRISIGDLIELFTKI 177 (369)
Q Consensus 134 p~~~~fil~t~~~---~~ll~TI~SRcq~~~f~~l~~~~i~~~L~~i 177 (369)
T Consensus 335 PA~F~LVa-AmNPCPCG~~~~~-~~~C--------t~~~~~rY~~rl 371 (506)
T PRK09862 335 PARFQLVA-AMNPSPTGHYQGN-HNRC--------TPEQTLRYLNRL 371 (506)
T ss_pred CCHHHHEH-HCCCCCCCCCCCC-CCCC--------CHHHHHHHHHHC
T ss_conf 15331111-0378888889999-7778--------989999998656