HHsearch alignment for GI: peg_472 and conserved domain: PRK10923
>PRK10923 glnG nitrogen regulation protein NR(I); Provisional.
Probab=98.49 E-value=2.3e-06 Score=67.09 Aligned_cols=206 Identities=19% Similarity=0.241 Sum_probs=115.3
Q ss_pred CCCHHHHHHHHHHHHHC-CCCCEEEHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC-CCCCCHHHHHHHC--CCCCC
Q ss_conf 92848999999999982-87670620107879888899999999961468777886658-7899977999977--98778
Q 537021.9.peg.4 1 MIGQKPMIKTLTNAFKS-GRIAQSYMLSGTRGIGKTTTARIIARSLNYKTAHIDVPTVE-FEGFGEHCQAIIR--GNHVD 76 (369)
Q Consensus 1 iiGq~~~~~~l~~~~~~-~~~~ha~lf~G~~G~GK~~~a~~~A~~l~c~~~~~~~~~~~-~c~~c~~c~~i~~--~~~~d 76 (369)
T Consensus 140 liG~S~~m~~v~~~i~~~a~~~~pVLI~GE~GTGK~~~Ar~IH----~~S~r~~~pfi~vnC~~~~~-~~~e~eLFG~-- 212 (469)
T PRK10923 140 IIGEAPAMQDVFRIIGRLSRSSISVLINGESGTGKELVAHALH----RHSPRAKAPFIALNMAAIPK-DLIESELFGH-- 212 (469)
T ss_pred CEECCHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHH----HCCCCCCCCCEEEECCCCCH-HHHHHHHHCC--
T ss_conf 5468999999999999985889978998989826999999999----74887799957876788997-7899997087--
Q ss_pred CCCCCCCCCCCHHHHH-HHHHHHHHHHHCCCCCEEEEECHHHCCCCHHHHHHHHHHHC-----------CCCCCEEEEEC
Q ss_conf 2224533223345556-65554456542046523775115664800167899999721-----------22111466506
Q 537021.9.peg.4 77 VVELDAASHTSIDDVR-EIIDQIYYKPISARFRVYIMDEVQMLSTAAFNGLLKTLEEP-----------PPHVKFIFATT 144 (369)
Q Consensus 77 ~~e~~~~s~~~id~ir-~l~~~~~~~p~~~~~kv~iid~a~~m~~~a~NaLLK~lEEP-----------p~~~~fil~t~ 144 (369)
T Consensus 213 --~-~ga-f~ga~~~~~g~~e-------~a~~GTLfLdeI~~L~~~~Q~kLl~~L~~~~~~~~g~~~~~~~d~RiIaat~ 281 (469)
T PRK10923 213 --E-KGA-FTGANTIRQGRFE-------QADGGTLFLDEIGDMPLDVQTRLLRVLADGQFYRVGGYAPVKVDVRIIAATH 281 (469)
T ss_pred --C-CCC-CCCCCCCCCCCHH-------HCCCCCEEHHHHHHCCHHHHHHHHHHHHCCCEEECCCCCEEEECCEEEEECC
T ss_conf --6-678-7886424587366-------4389926566366489999999999985593785799851221437997078
Q ss_pred CC-------CCCCHHHHHHHH--HHHCCCCCC--HHHHHH----HHHHHHHCC---CCCCHHHHHHH-HHCCCCCCCHHH
Q ss_conf 75-------433035675433--321024540--013567----876431013---45625664456-531676420011
Q 537021.9.peg.4 145 EI-------RKIPITVLSRCQ--RFDLHRISI--GDLIEL----FTKILQEES---IEFDPEAVAMI-ARASDGSARDGL 205 (369)
Q Consensus 145 ~~-------~~ll~TI~SRcq--~~~f~~l~~--~~i~~~----L~~i~~~E~---i~~d~~~l~~i-a~~s~GslR~Al 205 (369)
T Consensus 282 ~~L~~~v~~g~Fr~dLyyrL~~~~I~lPpLReR~eDI~~L~~~fl~~~~~~~~~~~~~~s~~a~~~L~~y~WPGNvrEL~ 361 (469)
T PRK10923 282 QNLEQRVQEGKFREDLFHRLNVIRVHLPPLRERREDIPRLARHFLQVAARELGVEAKLLHPETEAALTRLAWPGNVRQLE 361 (469)
T ss_pred CCHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHH
T ss_conf 79999866081779999864424015846544653499999999999999859997878999999997499998799999
Q ss_pred HCCCCCCCHHHC-CCCHHHH
Q ss_conf 000111000000-1210322
Q 537021.9.peg.4 206 SLLDQAIARCND-KIVTSSV 224 (369)
Q Consensus 206 ~lLeq~i~~~~~-~i~~e~v 224 (369)
T Consensus 362 n~ier~~~~~~~~~i~~~dl 381 (469)
T PRK10923 362 NTCRWLTVMAAGQEVLIQDL 381 (469)
T ss_pred HHHHHHHHHCCCCCCCHHHC
T ss_conf 99999998579982547757