HHsearch alignment for GI: peg_472 and conserved domain: PRK10923

>PRK10923 glnG nitrogen regulation protein NR(I); Provisional.
Probab=98.49  E-value=2.3e-06  Score=67.09  Aligned_cols=206  Identities=19%  Similarity=0.241  Sum_probs=115.3

Q ss_pred             CCCHHHHHHHHHHHHHC-CCCCEEEHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC-CCCCCHHHHHHHC--CCCCC
Q ss_conf             92848999999999982-87670620107879888899999999961468777886658-7899977999977--98778
Q 537021.9.peg.4    1 MIGQKPMIKTLTNAFKS-GRIAQSYMLSGTRGIGKTTTARIIARSLNYKTAHIDVPTVE-FEGFGEHCQAIIR--GNHVD   76 (369)
Q Consensus         1 iiGq~~~~~~l~~~~~~-~~~~ha~lf~G~~G~GK~~~a~~~A~~l~c~~~~~~~~~~~-~c~~c~~c~~i~~--~~~~d   76 (369)
T Consensus       140 liG~S~~m~~v~~~i~~~a~~~~pVLI~GE~GTGK~~~Ar~IH----~~S~r~~~pfi~vnC~~~~~-~~~e~eLFG~--  212 (469)
T PRK10923        140 IIGEAPAMQDVFRIIGRLSRSSISVLINGESGTGKELVAHALH----RHSPRAKAPFIALNMAAIPK-DLIESELFGH--  212 (469)
T ss_pred             CEECCHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHH----HCCCCCCCCCEEEECCCCCH-HHHHHHHHCC--
T ss_conf             5468999999999999985889978998989826999999999----74887799957876788997-7899997087--


Q ss_pred             CCCCCCCCCCCHHHHH-HHHHHHHHHHHCCCCCEEEEECHHHCCCCHHHHHHHHHHHC-----------CCCCCEEEEEC
Q ss_conf             2224533223345556-65554456542046523775115664800167899999721-----------22111466506
Q 537021.9.peg.4   77 VVELDAASHTSIDDVR-EIIDQIYYKPISARFRVYIMDEVQMLSTAAFNGLLKTLEEP-----------PPHVKFIFATT  144 (369)
Q Consensus        77 ~~e~~~~s~~~id~ir-~l~~~~~~~p~~~~~kv~iid~a~~m~~~a~NaLLK~lEEP-----------p~~~~fil~t~  144 (369)
T Consensus       213 --~-~ga-f~ga~~~~~g~~e-------~a~~GTLfLdeI~~L~~~~Q~kLl~~L~~~~~~~~g~~~~~~~d~RiIaat~  281 (469)
T PRK10923        213 --E-KGA-FTGANTIRQGRFE-------QADGGTLFLDEIGDMPLDVQTRLLRVLADGQFYRVGGYAPVKVDVRIIAATH  281 (469)
T ss_pred             --C-CCC-CCCCCCCCCCCHH-------HCCCCCEEHHHHHHCCHHHHHHHHHHHHCCCEEECCCCCEEEECCEEEEECC
T ss_conf             --6-678-7886424587366-------4389926566366489999999999985593785799851221437997078


Q ss_pred             CC-------CCCCHHHHHHHH--HHHCCCCCC--HHHHHH----HHHHHHHCC---CCCCHHHHHHH-HHCCCCCCCHHH
Q ss_conf             75-------433035675433--321024540--013567----876431013---45625664456-531676420011
Q 537021.9.peg.4  145 EI-------RKIPITVLSRCQ--RFDLHRISI--GDLIEL----FTKILQEES---IEFDPEAVAMI-ARASDGSARDGL  205 (369)
Q Consensus       145 ~~-------~~ll~TI~SRcq--~~~f~~l~~--~~i~~~----L~~i~~~E~---i~~d~~~l~~i-a~~s~GslR~Al  205 (369)
T Consensus       282 ~~L~~~v~~g~Fr~dLyyrL~~~~I~lPpLReR~eDI~~L~~~fl~~~~~~~~~~~~~~s~~a~~~L~~y~WPGNvrEL~  361 (469)
T PRK10923        282 QNLEQRVQEGKFREDLFHRLNVIRVHLPPLRERREDIPRLARHFLQVAARELGVEAKLLHPETEAALTRLAWPGNVRQLE  361 (469)
T ss_pred             CCHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHH
T ss_conf             79999866081779999864424015846544653499999999999999859997878999999997499998799999


Q ss_pred             HCCCCCCCHHHC-CCCHHHH
Q ss_conf             000111000000-1210322
Q 537021.9.peg.4  206 SLLDQAIARCND-KIVTSSV  224 (369)
Q Consensus       206 ~lLeq~i~~~~~-~i~~e~v  224 (369)
T Consensus       362 n~ier~~~~~~~~~i~~~dl  381 (469)
T PRK10923        362 NTCRWLTVMAAGQEVLIQDL  381 (469)
T ss_pred             HHHHHHHHHCCCCCCCHHHC
T ss_conf             99999998579982547757