HHsearch alignment for GI: peg_472 and conserved domain: PRK11448
>PRK11448 hsdR type I restriction enzyme EcoKI subunit R; Provisional.
Probab=95.18 E-value=0.1 Score=32.81 Aligned_cols=138 Identities=15% Similarity=0.202 Sum_probs=72.0
Q ss_pred HHHHHHHHHHHHHCCCCCEEEHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCH----HHHHHHC------CC
Q ss_conf 4899999999998287670620107879888899999999961468777886658789997----7999977------98
Q 537021.9.peg.4 4 QKPMIKTLTNAFKSGRIAQSYMLSGTRGIGKTTTARIIARSLNYKTAHIDVPTVEFEGFGE----HCQAIIR------GN 73 (369)
Q Consensus 4 q~~~~~~l~~~~~~~~~~ha~lf~G~~G~GK~~~a~~~A~~l~c~~~~~~~~~~~~c~~c~----~c~~i~~------~~ 73 (369)
T Consensus 421 Q~~AI~~v~~a~~~~~-rr-aLl~MATGTGKTrtaial~~rLlk~~~~k--RILFLvDR~~L~~QA~~~F~~~~~~~~~~ 496 (1126)
T PRK11448 421 QEDAIQAVEKALANGQ-RE-ILLAMATGTGKTRTAIALMYRLLKAKRFK--RILFLVDRRALGEQALDAFKDTKIEGNQT 496 (1126)
T ss_pred HHHHHHHHHHHHHCCC-CC-EEEEECCCCCHHHHHHHHHHHHHHCCCCC--EEEEECCHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 9999999999998098-54-68872488858989999999999658767--25798565899999999875434545666
Q ss_pred CCCCCCC--------CCCCCCCHHHHHHHHHHHHH-----HHHCCCCCEEEEECHHH-------CCC---------CHHH
Q ss_conf 7782224--------53322334555665554456-----54204652377511566-------480---------0167
Q 537021.9.peg.4 74 HVDVVEL--------DAASHTSIDDVREIIDQIYY-----KPISARFRVYIMDEVQM-------LST---------AAFN 124 (369)
Q Consensus 74 ~~d~~e~--------~~~s~~~id~ir~l~~~~~~-----~p~~~~~kv~iid~a~~-------m~~---------~a~N 124 (369)
T Consensus 497 ~~~~~~v~~l~~~~~~~~~rv~isT~q~m~~~i~~~~~~~~~~~~~FDlIIiDEaHRgy~ld~em~e~e~~~rd~~s~~s 576 (1126)
T PRK11448 497 FASIYDIKGLTDKFPEDETKVHVATVQSMVKRILQSDDSEPPPVGQYDCIVVDEAHRGYTLDKEMTEGELQFRDQLDYVS 576 (1126)
T ss_pred CCHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHCCCCHHHHHH
T ss_conf 40022001025678787771999730789987523576779999851379897787887433231100010232024777
Q ss_pred HHHHHHHHCCCCCCEEEEECCCC
Q ss_conf 89999972122111466506754
Q 537021.9.peg.4 125 GLLKTLEEPPPHVKFIFATTEIR 147 (369)
Q Consensus 125 aLLK~lEEPp~~~~fil~t~~~~ 147 (369)
T Consensus 577 kyr~IldYF-D-A~~iGLTATP~ 597 (1126)
T PRK11448 577 KYRRVLDYF-D-AVKIGLTATPA 597 (1126)
T ss_pred HHHHHHHHH-H-HHHHCCCCCCC
T ss_conf 899998762-1-55404767999