HHsearch alignment for GI: peg_472 and conserved domain: PRK13531

>PRK13531 regulatory ATPase RavA; Provisional.
Probab=96.77  E-value=0.0052  Score=42.31  Aligned_cols=141  Identities=21%  Similarity=0.213  Sum_probs=76.4

Q ss_pred             HHHHHHHHHHHHCCCCCEEEHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCC
Q ss_conf             89999999999828767062010787988889999999996146877788665878999779999779877822245332
Q 537021.9.peg.4    5 KPMIKTLTNAFKSGRIAQSYMLSGTRGIGKTTTARIIARSLNYKTAHIDVPTVEFEGFGEHCQAIIRGNHVDVVELDAAS   84 (369)
Q Consensus         5 ~~~~~~l~~~~~~~~~~ha~lf~G~~G~GK~~~a~~~A~~l~c~~~~~~~~~~~~c~~c~~c~~i~~~~~~d~~e~~~~s   84 (369)
T Consensus        26 e~~i~l~lLaalag--eh-vlllGPPGtAKS~larrl~~~~-~~a~~F-------------eyLltRFstPe--ElF---   83 (498)
T PRK13531         26 SHAIRLCLLAALSG--ES-VFLLGPPGIAKSLIARRLKFAF-QHARAF-------------EYLMTRFSTPE--EVF---   83 (498)
T ss_pred             HHHHHHHHHHHHCC--CC-EEEECCCCHHHHHHHHHHHHHH-CCCHHH-------------HHHHHCCCCHH--HHC---
T ss_conf             99999999999728--94-6988899513889999999985-574089-------------99987469888--853---


Q ss_pred             CCCHHHHHHHHHH-HHHHHHCC---CCCEEEEECHHHCCCCHHHHHHHHHHHCC----------CCCCEEEEECC-CC--
Q ss_conf             2334555665554-45654204---65237751156648001678999997212----------21114665067-54--
Q 537021.9.peg.4   85 HTSIDDVREIIDQ-IYYKPISA---RFRVYIMDEVQMLSTAAFNGLLKTLEEPP----------PHVKFIFATTE-IR--  147 (369)
Q Consensus        85 ~~~id~ir~l~~~-~~~~p~~~---~~kv~iid~a~~m~~~a~NaLLK~lEEPp----------~~~~fil~t~~-~~--  147 (369)
T Consensus        84 --GP~si~~Lk~~g~y~R~t~G~LP~A~iaFLDEIfKansAILNtLLtilNEr~f~nG~~~~~vPL~~li~ASNElP~~~  161 (498)
T PRK13531         84 --GPLSIQALKDEGRYERLTSGYLPEAEIVFLDEIWKAGPAILNTLLTAINERRFRNGAHEEKIPMRLLVAASNELPEAD  161 (498)
T ss_pred             --CCCCHHHHHHCCEEEEECCCCCCCCEEEHHHHHHHCCHHHHHHHHHHHHHHEECCCCCEECCCHHHHHHCCCCCCCCC
T ss_conf             --833299871178489722675886613157878614889999999986464034798313044688643046799998


Q ss_pred             CCCHHHHHHHH-HHHCCCCCCHH
Q ss_conf             33035675433-32102454001
Q 537021.9.peg.4  148 KIPITVLSRCQ-RFDLHRISIGD  169 (369)
Q Consensus       148 ~ll~TI~SRcq-~~~f~~l~~~~  169 (369)
T Consensus       162 ~~L~AlyDRfL~R~~v~~v~~~~  184 (498)
T PRK13531        162 SSLEALYDRMLIRLWLDKVQDKA  184 (498)
T ss_pred             CCHHHHHHHHHHHEECCCCCCHH
T ss_conf             40788887644102231316766