HHsearch alignment for GI: peg_472 and conserved domain: PRK13853

>PRK13853 type IV secretion system protein VirB4; Provisional.
Probab=97.59  E-value=0.0067  Score=41.50  Aligned_cols=26  Identities=27%  Similarity=0.337  Sum_probs=19.8

Q ss_pred             CCCCCEEEHHCCCCCCCHHHHHHHHHH
Q ss_conf             287670620107879888899999999
Q 537021.9.peg.4   17 SGRIAQSYMLSGTRGIGKTTTARIIAR   43 (369)
Q Consensus        17 ~~~~~ha~lf~G~~G~GK~~~a~~~A~   43 (369)
T Consensus       423 ~~d~GHt-~I~G~TGsGKTtll~fL~a  448 (789)
T PRK13853        423 EHDVGMT-AIFGPIGRGKTTLMTFILA  448 (789)
T ss_pred             CCCCCCE-EEECCCCCCHHHHHHHHHH
T ss_conf             7887744-8878999988999999999