HHsearch alignment for GI: peg_472 and conserved domain: PRK13891
>PRK13891 conjugal transfer protein TrbE; Provisional.
Probab=95.64 E-value=0.24 Score=30.09 Aligned_cols=27 Identities=30% Similarity=0.439 Sum_probs=19.8
Q ss_pred CCCCCEEEHHCCCCCCCHHHHHHHHHHH
Q ss_conf 2876706201078798888999999999
Q 537021.9.peg.4 17 SGRIAQSYMLSGTRGIGKTTTARIIARS 44 (369)
Q Consensus 17 ~~~~~ha~lf~G~~G~GK~~~a~~~A~~ 44 (369)
T Consensus 485 v~DvGH-TlIiGpTGaGKTvll~fL~aQ 511 (852)
T PRK13891 485 VRDLGH-TFMFGPTGAGKSTHLGIIAAQ 511 (852)
T ss_pred CCCCCC-EEEECCCCCCHHHHHHHHHHH
T ss_conf 688664-078789999889999999999