HHsearch alignment for GI: peg_472 and conserved domain: PRK13894
>PRK13894 conjugal transfer ATPase TrbB; Provisional.
Probab=93.74 E-value=0.11 Score=32.63 Aligned_cols=37 Identities=24% Similarity=0.381 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHCCCCCEEEHHCCCCCCCHHHHHHHHHHHH
Q ss_conf 9999999999828767062010787988889999999996
Q 537021.9.peg.4 6 PMIKTLTNAFKSGRIAQSYMLSGTRGIGKTTTARIIARSL 45 (369)
Q Consensus 6 ~~~~~l~~~~~~~~~~ha~lf~G~~G~GK~~~a~~~A~~l 45 (369)
T Consensus 137 ~~a~~L~~~V~~r~---nilI~G~TgsGKTTll~all~~i 173 (320)
T PRK13894 137 EQREAIIAAVRAHR---NILVIGGTGSGKTTLVNAIINEM 173 (320)
T ss_pred HHHHHHHHHHHCCC---CEEEECCCCCCHHHHHHHHHHHH
T ss_conf 99999999997287---58998588865689999998632