HHsearch alignment for GI: peg_472 and conserved domain: PRK13898

Probab=97.17  E-value=0.031  Score=36.62  Aligned_cols=89  Identities=17%  Similarity=0.231  Sum_probs=51.5

Q ss_pred             HHCCCCCEEEEECHHHC--C---CCHHHHHHHHHHHCCCCCCEEEEECCCC-----CCCHHHHHHHH-HHHCCCCCCHHH
Q ss_conf             42046523775115664--8---0016789999972122111466506754-----33035675433-321024540013
Q 537021.9.peg.4  102 PISARFRVYIMDEVQML--S---TAAFNGLLKTLEEPPPHVKFIFATTEIR-----KIPITVLSRCQ-RFDLHRISIGDL  170 (369)
Q Consensus       102 p~~~~~kv~iid~a~~m--~---~~a~NaLLK~lEEPp~~~~fil~t~~~~-----~ll~TI~SRcq-~~~f~~l~~~~i  170 (369)
T Consensus       638 ~ldG~p~ii~iDE~W~~l~~~~f~~~i~~~lkt~RK--~N~~vv~aTQs~~d~~~s~i~~~iieq~~T~I~LPN~~A~~-  714 (800)
T PRK13898        638 SLDGTPSMIVLDEAWALIDNPVFAPKIKDWLKVLRK--LNTFVIFATQSVEDASKSAISDTLVQQTATQIFLPNLKATD-  714 (800)
T ss_pred             HCCCCCEEEEEECHHHHHCCHHHHHHHHHHHHHHHH--CCCEEEEEECCHHHHHCCCHHHHHHHHCCEEEECCCCCCHH-
T ss_conf             528982699960336663799999999999999987--39779998088999862846899998688579887811009-


Q ss_pred             HHHHHHHHHHCCCCCCHHHHHHHHHCCCCC
Q ss_conf             567876431013456256644565316764
Q 537021.9.peg.4  171 IELFTKILQEESIEFDPEAVAMIARASDGS  200 (369)
Q Consensus       171 ~~~L~~i~~~E~i~~d~~~l~~ia~~s~Gs  200 (369)
T Consensus       715 -~y~------~~f~Lt~~E~~~i~~~~~~s  737 (800)
T PRK13898        715 -IYR------SVFMLSEREYILIKHTDPTT  737 (800)
T ss_pred             -HHH------HHCCCCHHHHHHHHHCCCCC
T ss_conf             -999------86599999999997179657