>TIGR01842 type_I_sec_PrtD type I secretion system ATPase; InterPro: IPR010128 Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N terminus, but rather carry signals located toward the extreme C terminus to direct type I secretion.; GO: 0005524 ATP binding, 0015031 protein transport, 0016021 integral to membrane.

Probab=95.47 E-value=0.031 Score=36.61 Aligned_cols=120 Identities=20% Similarity=0.324 Sum_probs=63.0 Q ss_pred EEEHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHC---CCCCCC----CCC-CC--CCCC----- Q ss_conf 06201078798888999999999614687778866587899977999977---987782----224-53--3223----- Q 537021.9.peg.4 22 QSYMLSGTRGIGKTTTARIIARSLNYKTAHIDVPTVEFEGFGEHCQAIIR---GNHVDV----VEL-DA--ASHT----- 86 (369) Q Consensus 22 ha~lf~G~~G~GK~~~a~~~A~~l~c~~~~~~~~~~~~c~~c~~c~~i~~---~~~~d~----~e~-~~--~s~~----- 86 (369) T Consensus 357 e~laIIGPSgSGKStLaR~~vG~W~~~~G~VRL---D--G--adl~qWD~e~lG~~iGYLPQdvELF~GTva~NIARF~e 429 (556) T TIGR01842 357 EALAIIGPSGSGKSTLARILVGIWPPASGSVRL---D--G--ADLKQWDRETLGKHIGYLPQDVELFSGTVAENIARFGE 429 (556) T ss_pred CEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEE---E--H--HHHHCCCHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCC T ss_conf 458887478652588987887210135653364---0--3--34402375365880154798505076767640244688 Q ss_pred -----------CHHHHHHHHHHHHH------------------------HHHCCCCCEEEEECHH-HCCCCHHHHHHHHH Q ss_conf -----------34555665554456------------------------5420465237751156-64800167899999 Q 537021.9.peg.4 87 -----------SIDDVREIIDQIYY------------------------KPISARFRVYIMDEVQ-MLSTAAFNGLLKTL 130 (369) Q Consensus 87 -----------~id~ir~l~~~~~~------------------------~p~~~~~kv~iid~a~-~m~~~a~NaLLK~l 130 (369) T Consensus 430 n~d~~~iieAAklAGvHElIl~lP~GYDT~iG~~G~~LSGGQRQRIaLARAlyG~P~lvvLDEPNsNLD~~GE~AL~~Ai 509 (556) T TIGR01842 430 NADPEKIIEAAKLAGVHELILRLPDGYDTDIGEGGATLSGGQRQRIALARALYGDPKLVVLDEPNSNLDEEGEQALANAI 509 (556) T ss_pred CCCHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHH T ss_conf 78878999999760303575169688544313777778614689999999871798378732889876617899999999 Q ss_pred HH-CCCCCCEEEEECCCCC Q ss_conf 72-1221114665067543 Q 537021.9.peg.4 131 EE-PPPHVKFIFATTEIRK 148 (369) Q Consensus 131 EE-Pp~~~~fil~t~~~~~ 148 (369) T Consensus 510 ~~lK~rg~tvv~itHRp~l 528 (556) T TIGR01842 510 KALKARGITVVVITHRPSL 528 (556) T ss_pred HHHHHCCCEEEEEECHHHH T ss_conf 9998679728998410689

HHsearch alignment for GI: peg_472 and conserved domain: TIGR01842