HHsearch alignment for GI: peg_472 and conserved domain: TIGR02442
>TIGR02442 Cob-chelat-sub cobaltochelatase subunit; InterPro: IPR012804 Cobalamin (vitamin B12) can be complexed with metal via ATP-dependent reactions (aerobic pathway) (e.g., in Pseudomonas denitrificans) or via ATP-independent reactions (anaerobic pathway) (e.g., in Salmonella typhimurium) , . The corresponding cobalt chelatases are not homologous. Cobaltochelatase is responsible for the insertion of cobalt into the corrin ring of coenzyme B12 during its biosynthesis. Two versions have been well described. CbiK/CbiX is a monomeric, anaerobic version which acts early in the biosynthesis (IPR010388 from INTERPRO). CobNST is a trimeric, ATP-dependent, aerobic version which acts late in the biosynthesis, (IPR011953 from INTERPRO, IPR006537 from INTERPRO, IPR006538 from INTERPRO) . The two pathways differ in the point of cobalt insertion during corrin ring formation . There are apparently a number of variations on these two pathways, where the major differences seem to be concerned with the process of ring contraction . Cobaltochelatase shows similarities with magnesium chelatase, which is also a complex ATP-dependent enzyme made up of two separable components. However, unlike the situation in cobaltochelatase, one of these two components is membrane bound in magnesium chelatase . .
Probab=97.85 E-value=1.8e-05 Score=60.40 Aligned_cols=272 Identities=17% Similarity=0.197 Sum_probs=140.3
Q ss_pred CCCHHHHHHHHHHHHHCCCCCEEEHHCCCCCCCHHHHHHHHHHHH-------CCCCCCCCCCCCCCCCCCHHHHHHHC--
Q ss_conf 928489999999999828767062010787988889999999996-------14687778866587899977999977--
Q 537021.9.peg.4 1 MIGQKPMIKTLTNAFKSGRIAQSYMLSGTRGIGKTTTARIIARSL-------NYKTAHIDVPTVEFEGFGEHCQAIIR-- 71 (369)
Q Consensus 1 iiGq~~~~~~l~~~~~~~~~~ha~lf~G~~G~GK~~~a~~~A~~l-------~c~~~~~~~~~~~~c~~c~~c~~i~~-- 71 (369)
T Consensus 6 iVGQe~LK~ALLL~Av~P~iGG-VLirG~KGTAKSTaaR~L~~LLP~i~~v~gC~f~cdP~---~P~~~C~~C~~~~~~~ 81 (688)
T TIGR02442 6 IVGQEDLKLALLLNAVNPRIGG-VLIRGEKGTAKSTAARGLAALLPDIDVVAGCPFSCDPD---DPEEWCEECRRKLEEQ 81 (688)
T ss_pred CCCHHHHHHHHHHEEECCCCCE-EEEECCCCCHHHHHHHHHHHHCCHHHHHCCCCCCCCCC---CCCCCCHHHHHHHHCC
T ss_conf 2142798653210025266370-78877888627898884876160236640478887778---8704006767555204
Q ss_pred CCCCC------CCCC-CCCCC----CCHHHHHHHHH-HHHHHHH---CCCCCEEEEECHHHCCCCHHHHHHHHHHHCCCC
Q ss_conf 98778------2224-53322----33455566555-4456542---046523775115664800167899999721221
Q 537021.9.peg.4 72 GNHVD------VVEL-DAASH----TSIDDVREIID-QIYYKPI---SARFRVYIMDEVQMLSTAAFNGLLKTLEEPPPH 136 (369)
Q Consensus 72 ~~~~d------~~e~-~~~s~----~~id~ir~l~~-~~~~~p~---~~~~kv~iid~a~~m~~~a~NaLLK~lEEPp~~ 136 (369)
T Consensus 82 G~~~~~~~~~~~V~LPlgATEDRVvG~LDi~~al~~G~~~FqPGLLA~AhrGiLYiDEVNLLdDhlVD~lLDaaA~G~n- 160 (688)
T TIGR02442 82 GTLPSEQRPVPFVNLPLGATEDRVVGSLDIERALKEGEKAFQPGLLAEAHRGILYIDEVNLLDDHLVDVLLDAAAMGVN- 160 (688)
T ss_pred CCCCCCCCCCEEEECCCCCCHHHHCCHHHHHHHHHHCHHHHCCCCHHHHCCCEEEEEEECCCCCHHHHHHHHHHHCCCE-
T ss_conf 7753135873588658775233221305489998718566078861754687167852001441477899998764800-
Q ss_pred CCEEEEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH---CCCCCCCHHHHCCCCCCC
Q ss_conf 11466506754330356754333210245400135678764310134562566445653---167642001100011100
Q 537021.9.peg.4 137 VKFIFATTEIRKIPITVLSRCQRFDLHRISIGDLIELFTKILQEESIEFDPEAVAMIAR---ASDGSARDGLSLLDQAIA 213 (369)
Q Consensus 137 ~~fil~t~~~~~ll~TI~SRcq~~~f~~l~~~~i~~~L~~i~~~E~i~~d~~~l~~ia~---~s~GslR~Al~lLeq~i~ 213 (369)
T Consensus 161 ----------------------------------------~VEREG~S~~Hparf~L~GTMNPEEG~LRPQ--LLDRFGL 198 (688)
T TIGR02442 161 ----------------------------------------RVEREGLSVSHPARFVLIGTMNPEEGDLRPQ--LLDRFGL 198 (688)
T ss_pred ----------------------------------------EEEECCCCHHCHHHHHHHCCCCCCHHHHCHH--HHHHHHC
T ss_conf ----------------------------------------6763574300114553220378522110223--2424401
Q ss_pred HHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH----HHHHHHHHHCCCCC
Q ss_conf 00001210322000135677777888876301363346788765430476213578777534----89999997457412
Q 537021.9.peg.4 214 RCNDKIVTSSVRLMLALADRNRIMDLFGYLIKGDIINVLQEFSSQYDSGVNPSVILHDLAEF----THLVTRIKYIPEMA 289 (369)
Q Consensus 214 ~~~~~i~~e~v~~llg~~~~~~i~~Ll~ai~~~d~~~al~~l~~l~~~g~d~~~iL~~Ll~~----~rdll~~k~~~~~~ 289 (369)
T Consensus 199 -------------------------~V~v~~~~d~~~R~Ev~~Rrl~~d~dP~~F~~~~~~~~~~L~~~I~~AR~---lL 250 (688)
T TIGR02442 199 -------------------------CVDVAASRDPEERVEVIRRRLAFDADPEAFAARWAAEQEELRERIAAARS---LL 250 (688)
T ss_pred -------------------------EEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH---HC
T ss_conf -------------------------15502435866899999999754026778899999999999999999997---54
Q ss_pred CCCCCCHHHHHHHHHHHHHCCHHHHH--HHHHHHHHHHHHHHCC--CCHHHHHHHHHHHHHH
Q ss_conf 23449988999999998629989999--9999999999983027--8889999999999953
Q 537021.9.peg.4 290 DTLLYSEAENARALQYSKEVSITFLS--RFWQMILKGISEIEGF--SRPMEAVEMVLIRLAH 347 (369)
Q Consensus 290 ~~~~~~~~e~~~i~~~a~~i~~~~L~--~~lq~l~~a~~~Lk~n--~np~L~lE~lLlkL~~ 347 (369)
T Consensus 251 p~V~l~d~~~~~I~~lc~~~~V~GhRAdi~~~raArAlAAl~GR~~V~~eDv~~Aa~LvL~H 312 (688)
T TIGR02442 251 PSVRLSDSLLRFISELCIEFGVDGHRADIVMARAARALAALDGRRRVTAEDVREAAELVLPH 312 (688)
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHH
T ss_conf 77658889999999999972888525999999999999877288535377899999875232