HHsearch alignment for GI: peg_472 and conserved domain: TIGR03345
>TIGR03345 VI_ClpV1 type VI secretion ATPase, ClpV1 family. Members of this protein family are homologs of ClpB, an ATPase associated with chaperone-related functions. These ClpB homologs, designated ClpV1, are a key component of the bacterial pathogenicity-associated type VI secretion system.
Probab=99.28 E-value=1.1e-11 Score=106.21 Aligned_cols=183 Identities=23% Similarity=0.298 Sum_probs=120.7
Q ss_pred CCCHHHHHHHHHHHHHCCCCCEEEHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCC----
Q ss_conf 9284899999999998287670620107879888899999999961468777886658789997799997798778----
Q 537021.9.peg.4 1 MIGQKPMIKTLTNAFKSGRIAQSYMLSGTRGIGKTTTARIIARSLNYKTAHIDVPTVEFEGFGEHCQAIIRGNHVD---- 76 (369)
Q Consensus 1 iiGq~~~~~~l~~~~~~~~~~ha~lf~G~~G~GK~~~a~~~A~~l~c~~~~~~~~~~~~c~~c~~c~~i~~~~~~d---- 76 (369)
T Consensus 189 vIGRd~EI~r~iqIL~Rr~KNN-PiLVGepGVGKTAIvEGLA~rI~------------------------~g~VP~~L~~ 243 (852)
T TIGR03345 189 VLGRDDEIRQMIDILLRRRQNN-PILTGEAGVGKTAVVEGLALRIA------------------------AGDVPPALRN 243 (852)
T ss_pred CCCCHHHHHHHHHHHHHHCCCC-CEEECCCCCCHHHHHHHHHHHHH------------------------CCCCCHHHHC
T ss_conf 8694999999999998624799-74657999879999999999997------------------------6999867743
Q ss_pred --CCCCC------CCCCCC-HH-HHHHHHHHHHHHHHCCCCCEEEEECHHHC--------CCCHHHHHHHHHHHCCCCCC
Q ss_conf --22245------332233-45-55665554456542046523775115664--------80016789999972122111
Q 537021.9.peg.4 77 --VVELD------AASHTS-ID-DVREIIDQIYYKPISARFRVYIMDEVQML--------STAAFNGLLKTLEEPPPHVK 138 (369)
Q Consensus 77 --~~e~~------~~s~~~-id-~ir~l~~~~~~~p~~~~~kv~iid~a~~m--------~~~a~NaLLK~lEEPp~~~~ 138 (369)
T Consensus 244 ~~i~sLDlg~LvAGtkyRGeFEeRlk~ii~ei~~~~---~~iILFIDEiHtlvGAG~~~G~~DaaNiLKPaLar--Gelr 318 (852)
T TIGR03345 244 VRLLSLDLGLLQAGASVKGEFENRLKSVIDEVKASP---QPIILFIDEAHTLIGAGGQAGQGDAANLLKPALAR--GELR 318 (852)
T ss_pred CEEEEEEHHHHHHCCCCCCHHHHHHHHHHHHHHHCC---CCEEEEEEHHHHHCCCCCCCCCCCHHHHHHHHHHC--CCCE
T ss_conf 856786788886403576359999999999998489---97699963487752899888862278875178737--8734
Q ss_pred EEEEECCCC--CCC---HHHHHHHHHHHCCCCCCHHHHHHHHHHHH----HCCCCCCHHHHHHHHHCCCCCC------CH
Q ss_conf 466506754--330---35675433321024540013567876431----0134562566445653167642------00
Q 537021.9.peg.4 139 FIFATTEIR--KIP---ITVLSRCQRFDLHRISIGDLIELFTKILQ----EESIEFDPEAVAMIARASDGSA------RD 203 (369)
Q Consensus 139 fil~t~~~~--~ll---~TI~SRcq~~~f~~l~~~~i~~~L~~i~~----~E~i~~d~~~l~~ia~~s~Gsl------R~ 203 (369)
T Consensus 319 ~IGATT~~EYrk~iEkD~AL~RRFq~V~V~EPs~eeti~IL~glk~~yE~hH~V~i~d~Ai~aAv~LS~RYI~dR~LPDK 398 (852)
T TIGR03345 319 TIAATTWAEYKKYFEKDPALTRRFQVVKVEEPDEETAIRMLRGLAPVLEKHHGVLILDEAVVAAVELSHRYIPGRQLPDK 398 (852)
T ss_pred EEEECCHHHHHHHHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHCCCCCCCHH
T ss_conf 99835789998886426889962475527999879999999987999855479687089999999998721554558427
Q ss_pred HHHCCCCCCC
Q ss_conf 1100011100
Q 537021.9.peg.4 204 GLSLLDQAIA 213 (369)
Q Consensus 204 Al~lLeq~i~ 213 (369)
T Consensus 399 AIDLlDeA~A 408 (852)
T TIGR03345 399 AVSLLDTACA 408 (852)
T ss_pred HHHHHHHHHH
T ss_conf 8999999999