HHsearch alignment for GI: peg_472 and conserved domain: TIGR03345
>TIGR03345 VI_ClpV1 type VI secretion ATPase, ClpV1 family. Members of this protein family are homologs of ClpB, an ATPase associated with chaperone-related functions. These ClpB homologs, designated ClpV1, are a key component of the bacterial pathogenicity-associated type VI secretion system.
Probab=98.71 E-value=3e-07 Score=73.56 Aligned_cols=131 Identities=18% Similarity=0.312 Sum_probs=88.6
Q ss_pred CCCHHHHHHHHHHHHHCCCC-------C-EEEHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHH--
Q ss_conf 92848999999999982876-------7-0620107879888899999999961468777886658789997799997--
Q 537021.9.peg.4 1 MIGQKPMIKTLTNAFKSGRI-------A-QSYMLSGTRGIGKTTTARIIARSLNYKTAHIDVPTVEFEGFGEHCQAII-- 70 (369)
Q Consensus 1 iiGq~~~~~~l~~~~~~~~~-------~-ha~lf~G~~G~GK~~~a~~~A~~l~c~~~~~~~~~~~~c~~c~~c~~i~-- 70 (369)
T Consensus 568 ViGQ~~Av~~v~~ai~~sraGl~d~~rPigsFLFlGPTGVGKTElAK~LA~~LFg~e~~liR--~D-MSEy~E~hsvsrL 644 (852)
T TIGR03345 568 VIGQDHALEAIAERIRTARAGLEDPRKPLGVFLLVGPSGVGKTETALALAELLYGGEQNLIT--IN-MSEFQEAHTVSRL 644 (852)
T ss_pred HCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEE--EC-CHHHCCHHHHHHH
T ss_conf 72849999999999999871799999985689987899877899999999997198611478--42-2432104368786
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECHHHCCCCHHHHHHHHHHHCC-----------CCCCE
Q ss_conf 7987782224533223345556655544565420465237751156648001678999997212-----------21114
Q 537021.9.peg.4 71 RGNHVDVVELDAASHTSIDDVREIIDQIYYKPISARFRVYIMDEVQMLSTAAFNGLLKTLEEPP-----------PHVKF 139 (369)
Q Consensus 71 ~~~~~d~~e~~~~s~~~id~ir~l~~~~~~~p~~~~~kv~iid~a~~m~~~a~NaLLK~lEEPp-----------~~~~f 139 (369)
T Consensus 645 iGaPPGYV--------Gy~eGG~LTe~Vrr~Pys----VvLfDEIEKAHpdV~nilLQvlD~G~LtD~~Gr~vdF~NtII 712 (852)
T TIGR03345 645 KGSPPGYV--------GYGEGGVLTEAVRRKPYS----VVLLDEVEKAHPDVLELFYQVFDKGVMEDGEGREIDFKNTVI 712 (852)
T ss_pred CCCCCCCC--------CCCCCCHHHHHHHHCCCE----EEEECHHHHCCHHHHHHHHHHHCCCEEECCCCCEEECEEEEE
T ss_conf 38999766--------748777210988809986----888611300288999999987246777579999884521299
Q ss_pred EEEECCCC
Q ss_conf 66506754
Q 537021.9.peg.4 140 IFATTEIR 147 (369)
Q Consensus 140 il~t~~~~ 147 (369)
T Consensus 713 ImTS-N~G 719 (852)
T TIGR03345 713 LLTS-NAG 719 (852)
T ss_pred EECC-CHH
T ss_conf 9757-244