HHsearch alignment for GI: peg_472 and conserved domain: cd00046

>cd00046 DEXDc DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.

Probab=96.64  E-value=0.0073  Score=41.24  Aligned_cols=42  Identities=21%  Similarity=0.311  Sum_probs=23.8

Q ss_pred             CCCCCEEEEECHHHCCCCHHHH-HHHHHHHCCCCCCEEEEECC
Q ss_conf             0465237751156648001678-99999721221114665067
Q 537021.9.peg.4  104 SARFRVYIMDEVQMLSTAAFNG-LLKTLEEPPPHVKFIFATTE  145 (369)
Q Consensus       104 ~~~~kv~iid~a~~m~~~a~Na-LLK~lEEPp~~~~fil~t~~  145 (369)
T Consensus       101 ~~~~~~vViDEaH~~~~~~~~~~~~~~~~~~~~~~~~l~lSAT  143 (144)
T cd00046         101 LKKLDLLILDEAHRLLNQGFGLLGLKILLKLPKDRQVLLLSAT  143 (144)
T ss_pred             CCCCCEEEEECHHHHHCCCCHHHHHHHHHHCCCCCCEEEECCC
T ss_conf             5510099998888764379699999999967999948998289