HHsearch alignment for GI: peg_472 and conserved domain: cd01121
>cd01121 Sms Sms (bacterial radA) DNA repair protein. This protein is not related to archael radA any more than is to other RecA-like NTPases. Sms has a role in recombination and recombinational repair and is responsible for the stabilization or processing of branched DNA molecules.
Probab=96.39 E-value=0.025 Score=37.30 Aligned_cols=36 Identities=31% Similarity=0.483 Sum_probs=26.0
Q ss_pred HHHHHHHCCCCCEE-EHHCCCCCCCHHHHHHHHHHHH
Q ss_conf 99999982876706-2010787988889999999996
Q 537021.9.peg.4 10 TLTNAFKSGRIAQS-YMLSGTRGIGKTTTARIIARSL 45 (369)
Q Consensus 10 ~l~~~~~~~~~~ha-~lf~G~~G~GK~~~a~~~A~~l 45 (369)
T Consensus 70 ElDRVLGGGiVpGSvvLlgGePGIGKSTLLLQia~~l 106 (372)
T cd01121 70 ELDRVLGGGLVPGSVILIGGDPGIGKSTLLLQVAARL 106 (372)
T ss_pred HHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 6654005773067179982599886889999999999