HHsearch alignment for GI: peg_472 and conserved domain: cd01121

>cd01121 Sms Sms (bacterial radA) DNA repair protein. This protein is not related to archael radA any more than is to other RecA-like NTPases. Sms has a role in recombination and recombinational repair and is responsible for the stabilization or processing of branched DNA molecules.
Probab=96.39  E-value=0.025  Score=37.30  Aligned_cols=36  Identities=31%  Similarity=0.483  Sum_probs=26.0

Q ss_pred             HHHHHHHCCCCCEE-EHHCCCCCCCHHHHHHHHHHHH
Q ss_conf             99999982876706-2010787988889999999996
Q 537021.9.peg.4   10 TLTNAFKSGRIAQS-YMLSGTRGIGKTTTARIIARSL   45 (369)
Q Consensus        10 ~l~~~~~~~~~~ha-~lf~G~~G~GK~~~a~~~A~~l   45 (369)
T Consensus        70 ElDRVLGGGiVpGSvvLlgGePGIGKSTLLLQia~~l  106 (372)
T cd01121          70 ELDRVLGGGLVPGSVILIGGDPGIGKSTLLLQVAARL  106 (372)
T ss_pred             HHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHH
T ss_conf             6654005773067179982599886889999999999