HHsearch alignment for GI: peg_472 and conserved domain: cd01125

>cd01125 repA Hexameric Replicative Helicase RepA. RepA is encoded by a plasmid, which is found in most Gram negative bacteria. RepA is a 5'-3' DNA helicase which can utilize ATP, GTP and CTP to a lesser extent.
Probab=92.69  E-value=0.94  Score=25.66  Aligned_cols=25  Identities=20%  Similarity=0.331  Sum_probs=20.5

Q ss_pred             HHCCCCCCCHHHHHHHHHHHHCCCC
Q ss_conf             0107879888899999999961468
Q 537021.9.peg.4   25 MLSGTRGIGKTTTARIIARSLNYKT   49 (369)
Q Consensus        25 lf~G~~G~GK~~~a~~~A~~l~c~~   49 (369)
T Consensus         5 ~l~g~gG~GKS~lal~lAl~vA~G~   29 (239)
T cd01125           5 ALVAPGGTGKSSLLLVLALAMALGK   29 (239)
T ss_pred             EEEECCCCCHHHHHHHHHHHHHCCC
T ss_conf             9980899888999999999997599