>cd03239 ABC_SMC_head The structural maintenance of chromosomes (SMC) proteins are essential for successful chromosome transmission during replication and segregation of the genome in all organisms. SMCs are generally present as single proteins in bacteria, and as at least six distinct proteins in eukaryotes. The proteins range in size from approximately 110 to 170 kDa, and each has five distinct domains: amino- and carboxy-terminal globular domains, which contain sequences characteristic of ATPases, two coiled-coil regions separating the terminal domains , and a central flexible hinge. SMC proteins function together with other proteins in a range of chromosomal transactions, including chromosome condensation, sister-chromatid cohesion, recombination, DNA repair, and epigenetic silencing of gene expression.

Probab=94.12  E-value=0.28  Score=29.52  Aligned_cols=41  Identities=20%  Similarity=0.325  Sum_probs=25.2

Q ss_pred             CEEEEECHHH-CCCCHHHHHHHHHHHCCC-CCCEEEEECCCCC
Q ss_conf             2377511566-480016789999972122-1114665067543
Q 537021.9.peg.4  108 RVYIMDEVQM-LSTAAFNGLLKTLEEPPP-HVKFIFATTEIRK  148 (369)
Q Consensus       108 kv~iid~a~~-m~~~a~NaLLK~lEEPp~-~~~fil~t~~~~~  148 (369)
T Consensus       118 p~~iLDEvdAaLD~~N~~r~~~~i~el~~~~sQfIiITH~~~~  160 (178)
T cd03239         118 PFYVLDEIDAALDPTNRRRVSDMIKEMAKHTSQFIVITLKKEM  160 (178)
T ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHH
T ss_conf             6699827655479889999999999997389989999868999