HHsearch alignment for GI: peg_472 and conserved domain: cd03245
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=96.40 E-value=0.0062 Score=41.75 Aligned_cols=29 Identities=21% Similarity=0.334 Sum_probs=21.6
Q ss_pred EEEHHCCCCCCCHHHHHHHHHHHHCCCCC
Q ss_conf 06201078798888999999999614687
Q 537021.9.peg.4 22 QSYMLSGTRGIGKTTTARIIARSLNYKTA 50 (369)
Q Consensus 22 ha~lf~G~~G~GK~~~a~~~A~~l~c~~~ 50 (369)
T Consensus 31 ~~v~ivG~sGsGKSTLl~ll~gl~~p~~G 59 (220)
T cd03245 31 EKVAIIGRVGSGKSTLLKLLAGLYKPTSG 59 (220)
T ss_pred CEEEEECCCCCHHHHHHHHHHCCCCCCCC
T ss_conf 99999999998599999999672547865