HHsearch alignment for GI: peg_472 and conserved domain: cd03288
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=96.26 E-value=0.022 Score=37.78 Aligned_cols=24 Identities=21% Similarity=0.349 Sum_probs=19.3
Q ss_pred EEHHCCCCCCCHHHHHHHHHHHHC
Q ss_conf 620107879888899999999961
Q 537021.9.peg.4 23 SYMLSGTRGIGKTTTARIIARSLN 46 (369)
Q Consensus 23 a~lf~G~~G~GK~~~a~~~A~~l~ 46 (369)
T Consensus 49 ~vaIvG~sGsGKSTL~~ll~gl~~ 72 (257)
T cd03288 49 KVGICGRTGSGKSSLSLAFFRMVD 72 (257)
T ss_pred EEEEECCCCCCHHHHHHHHHHCCC
T ss_conf 999999999819999999960566