HHsearch alignment for GI: peg_472 and conserved domain: pfam00493

Probab=98.09  E-value=2.1e-05  Score=59.96  Aligned_cols=141  Identities=18%  Similarity=0.183  Sum_probs=80.1

Q ss_pred             CCCHHHHHHHHHHHHHCCC------------CCEEEHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf             9284899999999998287------------6706201078798888999999999614687778866587899977999
Q 537021.9.peg.4    1 MIGQKPMIKTLTNAFKSGR------------IAQSYMLSGTRGIGKTTTARIIARSLNYKTAHIDVPTVEFEGFGEHCQA   68 (369)
Q Consensus         1 iiGq~~~~~~l~~~~~~~~------------~~ha~lf~G~~G~GK~~~a~~~A~~l~c~~~~~~~~~~~~c~~c~~c~~   68 (369)
T Consensus        26 i~G~~~vK~ai~l~l~gg~~~~~~~~~~~Rg~ih-iLLvGdPG~gKSqlLk~~~~~~----pr~~~----tsg~~ss~--   94 (327)
T pfam00493        26 IYGHEDVKKAILLQLFGGVKKNLPDGTRLRGDIN-VLLVGDPGTAKSQLLKYVAKLA----PRAVY----TSGKGSSA--   94 (327)
T ss_pred             CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCE-EEEECCCCCCHHHHHHHHHHHC----CCCEE----ECCCCCCC--
T ss_conf             2498799999999980898765888862036511-8984699815609999999868----87088----31776656--


Q ss_pred             HHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH---HCCCCCEEEEECHHHCCCCHHHHHHHHHHHCCCCC--------
Q ss_conf             9779877822245332233455566555445654---20465237751156648001678999997212211--------
Q 537021.9.peg.4   69 IIRGNHVDVVELDAASHTSIDDVREIIDQIYYKP---ISARFRVYIMDEVQMLSTAAFNGLLKTLEEPPPHV--------  137 (369)
Q Consensus        69 i~~~~~~d~~e~~~~s~~~id~ir~l~~~~~~~p---~~~~~kv~iid~a~~m~~~a~NaLLK~lEEPp~~~--------  137 (369)
T Consensus        95 ------~G---LTa~~--~~d~~--~~~~-~leaGalvlAd~Gv~cIDEfdk~~~~d~saL~EAMEqqtVsIaKaGi~~t  160 (327)
T pfam00493        95 ------AG---LTAAV--VRDPD--TGEW-TLEAGALVLADGGVCCIDEFDKMNEEDRVAIHEAMEQQTISIAKAGIVAT  160 (327)
T ss_pred             ------CC---CEEEE--EEECC--CCCE-EEECCCEEECCCCEEEEECCCCCCHHHHHHHHHHHHHCEEEEECCCEEEE
T ss_conf             ------77---61589--98068--8836-98368477558982785005558876799999999868177633853897


Q ss_pred             ----CEEEEECCCCC--------------CCHHHHHHH-HHHHCCCCC
Q ss_conf             ----14665067543--------------303567543-332102454
Q 537021.9.peg.4  138 ----KFIFATTEIRK--------------IPITVLSRC-QRFDLHRIS  166 (369)
Q Consensus       138 ----~fil~t~~~~~--------------ll~TI~SRc-q~~~f~~l~  166 (369)
T Consensus       161 L~ar~sVlAaaNP~~g~yd~~~~~~~ni~Lp~~lLsRFDLif~l~D~~  208 (327)
T pfam00493       161 LNARCSVLAAANPIFGRYDPKKSVAENINLPPPLLSRFDLIFVLLDKP  208 (327)
T ss_pred             ECCCCEEEEEECCCCCCCCCCCCHHHHCCCCHHHHCCEEEEEEEECCC
T ss_conf             258717998527767737888898885589767745010798840689