HHsearch alignment for GI: peg_472 and conserved domain: pfam00910

>pfam00910 RNA_helicase RNA helicase. This family includes RNA helicases thought to be involved in duplex unwinding during viral RNA replication. Members of this family are found in a variety of single stranded RNA viruses.

Probab=94.87  E-value=0.018  Score=38.32  Aligned_cols=24  Identities=42%  Similarity=0.544  Sum_probs=20.8

Q ss_pred             HHCCCCCCCHHHHHHHHHHHHCCC
Q ss_conf             010787988889999999996146
Q 537021.9.peg.4   25 MLSGTRGIGKTTTARIIARSLNYK   48 (369)
Q Consensus        25 lf~G~~G~GK~~~a~~~A~~l~c~   48 (369)
T Consensus         2 ~l~G~~G~GKS~~a~~la~~~~~~   25 (105)
T pfam00910         2 WLYGPPGCGKSTLAKYLARALLDH   25 (105)
T ss_pred             EEECCCCCCHHHHHHHHHHHHHHH
T ss_conf             897999898899999999999998