HHsearch alignment for GI: peg_472 and conserved domain: pfam05729
>pfam05729 NACHT NACHT domain. This NTPase domain is found in apoptosis proteins as well as those involved in MHC transcription activation. This family is closely related to pfam00931.
Probab=97.07 E-value=0.0024 Score=44.85 Aligned_cols=143 Identities=17% Similarity=0.162 Sum_probs=64.2
Q ss_pred EHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCC----CCCCCCCHHHHHHHHHHHH
Q ss_conf 201078798888999999999614687778866587899977999977987782224----5332233455566555445
Q 537021.9.peg.4 24 YMLSGTRGIGKTTTARIIARSLNYKTAHIDVPTVEFEGFGEHCQAIIRGNHVDVVEL----DAASHTSIDDVREIIDQIY 99 (369)
Q Consensus 24 ~lf~G~~G~GK~~~a~~~A~~l~c~~~~~~~~~~~~c~~c~~c~~i~~~~~~d~~e~----~~~s~~~id~ir~l~~~~~ 99 (369)
T Consensus 3 i~i~G~aG~GKTtll~kl~~~wa--~g~~~~-~-~~~vf~~~~r~~~~~~~~sl~~ll~~~~~~~~~~~~~~---~~~~~ 75 (165)
T pfam05729 3 VILQGEAGSGKTTLLQKLALLWA--QGKLPQ-D-FDFVFFLPCRELSRSGEASLADLLFSQWPEPAAPVSEV---WAVIL 75 (165)
T ss_pred EEEECCCCCCHHHHHHHHHHHHH--CCCCCC-C-CCEEEEEEHHHHCCCCCCCHHHHHHHHCCCCCCCHHHH---HHHHH
T ss_conf 99982798989999999999998--698436-9-72899999567077766899999998767745763789---99998
Q ss_pred HHHHCCCCCEEEEECHHHCCCC--------HHHH-HHHHHHHC-CCCCCEEEEECCCCCC--CHHHHHHHHHHHCCCCCC
Q ss_conf 6542046523775115664800--------1678-99999721-2211146650675433--035675433321024540
Q 537021.9.peg.4 100 YKPISARFRVYIMDEVQMLSTA--------AFNG-LLKTLEEP-PPHVKFIFATTEIRKI--PITVLSRCQRFDLHRISI 167 (369)
Q Consensus 100 ~~p~~~~~kv~iid~a~~m~~~--------a~Na-LLK~lEEP-p~~~~fil~t~~~~~l--l~TI~SRcq~~~f~~l~~ 167 (369)
T Consensus 76 ---~~~~k~L~ilDGlDE~~~~~~~~~~~~~~~~~l~~ll~~~~lp~~-~vliTsRp~~~~~l~~~~~~~~~~ei~GFs~ 151 (165)
T pfam05729 76 ---ELPERVLLILDGLDELASDLGQLDGPLPVLTLLSSLLRKKLLPGA-SLLLTSRPDALRDLRRGLEEPRYLEVLGFSE 151 (165)
T ss_pred ---HCCCCEEEEECCHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCC-EEEEEECCCHHHHHHHHCCCCCEEEECCCCH
T ss_conf ---397728999648455144435644457799999999841527886-4999968037988577648871899889999
Q ss_pred HHHHHHHHHH
Q ss_conf 0135678764
Q 537021.9.peg.4 168 GDLIELFTKI 177 (369)
Q Consensus 168 ~~i~~~L~~i 177 (369)
T Consensus 152 ~~~~~yi~~~ 161 (165)
T pfam05729 152 EDRKQYVRKY 161 (165)
T ss_pred HHHHHHHHHH
T ss_conf 9999999986