HHsearch alignment for GI: peg_472 and conserved domain: pfam06068
>pfam06068 TIP49 TIP49 C-terminus. This family consists of the C-terminal region of several eukaryotic and archaeal RuvB-like 1 (Pontin or TIP49a) and RuvB-like 2 (Reptin or TIP49b) proteins. The N-terminal domain contains the pfam00004 domain. In zebrafish, the liebeskummer (lik) mutation, causes development of hyperplastic embryonic hearts. lik encodes Reptin, a component of a DNA-stimulated ATPase complex. Beta-catenin and Pontin, a DNA-stimulated ATPase that is often part of complexes with Reptin, are in the same genetic pathways. The Reptin/Pontin ratio serves to regulate heart growth during development, at least in part via the beta-catenin pathway. TBP-interacting protein 49 (TIP49) was originally identified as a TBP-binding protein, and two related proteins are encoded by individual genes, tip49a and b. Although the function of this gene family has not been elucidated, they are supposed to play a critical role in nuclear events because they interact with various kinds of nuclear
Probab=99.48 E-value=6.8e-13 Score=115.25 Aligned_cols=102 Identities=27% Similarity=0.374 Sum_probs=91.6
Q ss_pred CCEEEEECHHHCCCCHHHHHHHHHHHCCCCCCEEEEEC------------CCCCCCHHHHHHHHHHHCCCCCCHHHHHHH
Q ss_conf 52377511566480016789999972122111466506------------754330356754333210245400135678
Q 537021.9.peg.4 107 FRVYIMDEVQMLSTAAFNGLLKTLEEPPPHVKFIFATT------------EIRKIPITVLSRCQRFDLHRISIGDLIELF 174 (369)
Q Consensus 107 ~kv~iid~a~~m~~~a~NaLLK~lEEPp~~~~fil~t~------------~~~~ll~TI~SRcq~~~f~~l~~~~i~~~L 174 (369)
T Consensus 276 pGVLFIDEvHMLDiEcFsfLnralEs~laP-ivI~ATNRG~~~IRGTd~~sPHGiP~DlLDRllII~T~py~~~ei~~Ii 354 (395)
T pfam06068 276 PGVLFIDEVHMLDIECFSFLNRALESELAP-IVILATNRGICTIRGTDIISPHGIPLDLLDRLLIITTEPYTREEIKQIL 354 (395)
T ss_pred CCCEEEECCHHCCHHHHHHHHHHHCCCCCC-EEEEEECCCCEEECCCCCCCCCCCCHHHHHHEEEEECCCCCHHHHHHHH
T ss_conf 274688500000058998887765056787-6999844652035256775888998777730258856889989999999
Q ss_pred HHHHHHCCCCCCHHHHHHHHHCC-CCCCCHHHHCCC
Q ss_conf 76431013456256644565316-764200110001
Q 537021.9.peg.4 175 TKILQEESIEFDPEAVAMIARAS-DGSARDGLSLLD 209 (369)
Q Consensus 175 ~~i~~~E~i~~d~~~l~~ia~~s-~GslR~Al~lLe 209 (369)
T Consensus 355 ~iRa~~E~v~l~~~al~~L~~ig~~~SLRYaiqLlt 390 (395)
T pfam06068 355 EIRAQEEGVEISEEALDLLAKIGEETSLRYAIQLLT 390 (395)
T ss_pred HHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHC
T ss_conf 987776078779899999998653202999998725