HHsearch alignment for GI: peg_476 and conserved domain: COG2244
>COG2244 RfbX Membrane protein involved in the export of O-antigen and teichoic acid [General function prediction only].
Probab=99.39 E-value=1e-08 Score=65.83 Aligned_cols=152 Identities=19% Similarity=0.320 Sum_probs=81.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
Q ss_conf 89999999999999999999999999999999576567999999996349999999865566777558999999851007
Q 537021.9.peg.4 2 LMKLVRNFFTLVASESVNRCLGFVRASLMAAVFGVGKITDAFYTVAYVEFIFVRLAARGDGVIHNSFIPMFSQRREQNGS 81 (241)
Q Consensus 2 ~m~l~r~~~~i~~~tl~SrilGf~Re~~~A~~fGa~~~~DAf~~A~~iP~~l~~l~~~~~Gal~~~fIP~~~~~~~~~~~ 81 (241)
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~lar~lg~-~~~G~~~~~~~~~~~~~~~~~~---G~~~ai~r~ia~~~~~~~~ 80 (480)
T COG2244 5 KKKLIKGALWLLLGTLISALLGLITIPLLARLLGP-EGFGLYALALAIIGLFSILADF---GLPAAITREIAEYREKGEY 80 (480)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHHHHHHH---CCCHHHHHHHHHHHCCHHH
T ss_conf 88999989999999999999999999999999199-9999999999999999999994---8209999998886010056
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999871433210247632102468889999999999999899999999999999986
Q 537021.9.peg.4 82 ENAWRLSSEVFSVLLPILMVMIMVIELVLPLLVRYVMAPGFPYQSDEYFLTVQLSRVVMPSIFFISLASLVTGILFASGR 161 (241)
Q Consensus 82 ~~a~~~~~~~~~~~~~~~~~i~~l~~ifap~~v~~l~apGf~~~~~~~~la~~l~ri~~p~i~f~~l~~i~~~~L~a~~~ 161 (241)
T Consensus 81 ~~~~~~~---~~~~l~~~~~~~~~~~~~-----~~~~~~-~--~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (480)
T COG2244 81 LLLILLS---VLLLLLLALILLLLLLLI-----AYLLAP-I--DP----VLALLLRILSLALLLLPLSSVLRGLFQGFGR 145 (480)
T ss_pred HHHHHHH---HHHHHHHHHHHHHHHHHH-----HHHHCC-C--CH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 8999999---999999999999999999-----998421-3--20----4899999999999999999999999999998
Q ss_pred HHHHHHHHHHHH
Q ss_conf 899867778899
Q 537021.9.peg.4 162 YFIACMPSMVIH 173 (241)
Q Consensus 162 F~~~a~~pi~~N 173 (241)
T Consensus 146 ~~~~~~~-~~~~ 156 (480)
T COG2244 146 FGPLALS-IVSS 156 (480)
T ss_pred HHHHHHH-HHHH
T ss_conf 9999999-9999