HHsearch alignment for GI: peg_476 and conserved domain: PRK09575

>PRK09575 vmrA multidrug efflux pump VmrA; Reviewed.
Probab=99.51  E-value=2e-10  Score=75.15  Aligned_cols=211  Identities=14%  Similarity=0.084  Sum_probs=147.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             99999999999999999999999999---999957656799999999634999999986556677755899999985100
Q 537021.9.peg.4    4 KLVRNFFTLVASESVNRCLGFVRASL---MAAVFGVGKITDAFYTVAYVEFIFVRLAARGDGVIHNSFIPMFSQRREQNG   80 (241)
Q Consensus         4 ~l~r~~~~i~~~tl~SrilGf~Re~~---~A~~fGa~~~~DAf~~A~~iP~~l~~l~~~~~Gal~~~fIP~~~~~~~~~~   80 (241)
T Consensus       234 ~~~~~i~~iG~p~~i~~~~~s~~~~~~n~~~~~~g~~~~vAa~~i~~~i~~~~~~~~~----Gl~~a~~~lvg~n~GA~~  309 (456)
T PRK09575        234 SLAPQIVLLGSSSFFMYLYGSFVVALHNRLFMEYGSSLTVGAFAIVGYLMVLYYLVAE----GIAEGMQPPVSYYFGARQ  309 (456)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHCCCC
T ss_conf             9999999984799999999999999999999997769999999999999999999999----998878999999856998


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             79999999999999999999999999987143321024763210246888999999999999989999999999999998
Q 537021.9.peg.4   81 SENAWRLSSEVFSVLLPILMVMIMVIELVLPLLVRYVMAPGFPYQSDEYFLTVQLSRVVMPSIFFISLASLVTGILFASG  160 (241)
Q Consensus        81 ~~~a~~~~~~~~~~~~~~~~~i~~l~~ifap~~v~~l~apGf~~~~~~~~la~~l~ri~~p~i~f~~l~~i~~~~L~a~~  160 (241)
T Consensus       310 ~~rv~~~~~~~~~~~~~~~~~~~~l~~~f~~~l~~-lF~---~~d~~vi~~~~~~l~i~~~~~~~~g~~~v~~~~f~a~g  385 (456)
T PRK09575        310 YDNIKKLLKLAMKVSVIAGIAWVLLLNLFPETMVS-LFN---SGDPELIAETIVGIRLHLFAMFLDGFLVLASAYFMAVN  385 (456)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             89999999999999999999999999999999998-756---99889999999999999999999999999999998879


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf             689986777889999999999999604655731689999999999999999999999997398777768
Q 537021.9.peg.4  161 RYFIACMPSMVIHILPIFVLTYALCYGSNMHKAEMIYLLCWGVFLAHAVYFWILYLSAKKSGVELRFQY  229 (241)
Q Consensus       161 ~F~~~a~~pi~~Ni~~I~~~~~~~~~~~~~~~~~~i~~la~g~~lg~~~q~l~~~~~l~k~g~~~~~~~  229 (241)
T Consensus       386 ~~~~~~~~sl~~~~i~lp~~~il~~~-------~G~~GiW~a~~is~~~~~~~~~~~~~r~~kkl~k~~  447 (456)
T PRK09575        386 QGGKALFISIGNMLIQLPFLFILPKW-------LGIDGVWLAMPLSNIALSLVVAPMLWRDLKKLKKKH  447 (456)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             94999999999999999999999999-------817599999999999999999999999999985428