HHsearch alignment for GI: peg_476 and conserved domain: PRK09575
>PRK09575 vmrA multidrug efflux pump VmrA; Reviewed.
Probab=99.51 E-value=2e-10 Score=75.15 Aligned_cols=211 Identities=14% Similarity=0.084 Sum_probs=147.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99999999999999999999999999---999957656799999999634999999986556677755899999985100
Q 537021.9.peg.4 4 KLVRNFFTLVASESVNRCLGFVRASL---MAAVFGVGKITDAFYTVAYVEFIFVRLAARGDGVIHNSFIPMFSQRREQNG 80 (241)
Q Consensus 4 ~l~r~~~~i~~~tl~SrilGf~Re~~---~A~~fGa~~~~DAf~~A~~iP~~l~~l~~~~~Gal~~~fIP~~~~~~~~~~ 80 (241)
T Consensus 234 ~~~~~i~~iG~p~~i~~~~~s~~~~~~n~~~~~~g~~~~vAa~~i~~~i~~~~~~~~~----Gl~~a~~~lvg~n~GA~~ 309 (456)
T PRK09575 234 SLAPQIVLLGSSSFFMYLYGSFVVALHNRLFMEYGSSLTVGAFAIVGYLMVLYYLVAE----GIAEGMQPPVSYYFGARQ 309 (456)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHCCCC
T ss_conf 9999999984799999999999999999999997769999999999999999999999----998878999999856998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 79999999999999999999999999987143321024763210246888999999999999989999999999999998
Q 537021.9.peg.4 81 SENAWRLSSEVFSVLLPILMVMIMVIELVLPLLVRYVMAPGFPYQSDEYFLTVQLSRVVMPSIFFISLASLVTGILFASG 160 (241)
Q Consensus 81 ~~~a~~~~~~~~~~~~~~~~~i~~l~~ifap~~v~~l~apGf~~~~~~~~la~~l~ri~~p~i~f~~l~~i~~~~L~a~~ 160 (241)
T Consensus 310 ~~rv~~~~~~~~~~~~~~~~~~~~l~~~f~~~l~~-lF~---~~d~~vi~~~~~~l~i~~~~~~~~g~~~v~~~~f~a~g 385 (456)
T PRK09575 310 YDNIKKLLKLAMKVSVIAGIAWVLLLNLFPETMVS-LFN---SGDPELIAETIVGIRLHLFAMFLDGFLVLASAYFMAVN 385 (456)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 89999999999999999999999999999999998-756---99889999999999999999999999999999998879
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 689986777889999999999999604655731689999999999999999999999997398777768
Q 537021.9.peg.4 161 RYFIACMPSMVIHILPIFVLTYALCYGSNMHKAEMIYLLCWGVFLAHAVYFWILYLSAKKSGVELRFQY 229 (241)
Q Consensus 161 ~F~~~a~~pi~~Ni~~I~~~~~~~~~~~~~~~~~~i~~la~g~~lg~~~q~l~~~~~l~k~g~~~~~~~ 229 (241)
T Consensus 386 ~~~~~~~~sl~~~~i~lp~~~il~~~-------~G~~GiW~a~~is~~~~~~~~~~~~~r~~kkl~k~~ 447 (456)
T PRK09575 386 QGGKALFISIGNMLIQLPFLFILPKW-------LGIDGVWLAMPLSNIALSLVVAPMLWRDLKKLKKKH 447 (456)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 94999999999999999999999999-------817599999999999999999999999999985428