HHsearch alignment for GI: peg_476 and conserved domain: TIGR01695
>TIGR01695 mviN integral membrane protein MviN; InterPro: IPR004268 The sequencing of a number of pathogenic bacterial genomes has led to novel virulence proteins being discovered that are yet to be biochemically characterised. One example is the MviN family of proteins, first described in Salmonella , and conserved across a wide variety of pathogens in both animals and plants. Further work on these proteins of as yet unknown function has revealed they are integral membrane molecules, and are part of an operon essential in at least one species . ; GO: 0009405 pathogenesis, 0016021 integral to membrane.
Probab=99.57 E-value=5.3e-11 Score=78.35 Aligned_cols=227 Identities=14% Similarity=0.170 Sum_probs=183.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 89999999999999999999999999--9999995765679999999963499999998655667775589999998510
Q 537021.9.peg.4 2 LMKLVRNFFTLVASESVNRCLGFVRA--SLMAAVFGVGKITDAFYTVAYVEFIFVRLAARGDGVIHNSFIPMFSQRREQN 79 (241)
Q Consensus 2 ~m~l~r~~~~i~~~tl~SrilGf~Re--~~~A~~fGa~~~~DAf~~A~~iP~~l~~l~~~~~Gal~~~fIP~~~~~~~~~ 79 (241)
T Consensus 243 l~~~l~~~~p~~lg~s~~q~~~l~~t~L~~~AS~l~~Gs~s-~~~yA~r~~~LP~gif~v---sl~~v~lP~~s~~~~~~ 318 (538)
T TIGR01695 243 LKRFLKLMLPTTLGVSASQITLLINTRLLALASFLEIGSVS-ALYYASRLYQLPLGIFGV---SLATVLLPKLSKHASEG 318 (538)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH-HHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHCCC
T ss_conf 99999999999999999999999999999873155268999-999999999989999999---99999999999885026
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 07999999999999999999999999998714332102476321024688899999999999998999999999999999
Q 537021.9.peg.4 80 GSENAWRLSSEVFSVLLPILMVMIMVIELVLPLLVRYVMAPGFPYQSDEYFLTVQLSRVVMPSIFFISLASLVTGILFAS 159 (241)
Q Consensus 80 ~~~~a~~~~~~~~~~~~~~~~~i~~l~~ifap~~v~~l~apGf~~~~~~~~la~~l~ri~~p~i~f~~l~~i~~~~L~a~ 159 (241)
T Consensus 319 ~~~~~~~~~~~~i~~~~~l~~P~s~~l~~ls~~I~~llf~~g-~F~~~~~~~ta~~L~~y~lGl~~~~l~~vL~~~fYA~ 397 (538)
T TIGR01695 319 NWNELEELLNQGIRLTLLLTIPSSFGLLVLSEPIVSLLFERG-AFSEEDALMTATILAAYALGLIFYSLQKVLLRAFYAR 397 (538)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 868999999999999999999999999998899999885378-8888899999999999999899999999998778755
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH
Q ss_conf 868998677788999999999-9999604655731689999999999999999999999997398777768899989985
Q 537021.9.peg.4 160 GRYFIACMPSMVIHILPIFVL-TYALCYGSNMHKAEMIYLLCWGVFLAHAVYFWILYLSAKKSGVELRFQYPRLTCNVKL 238 (241)
Q Consensus 160 ~~F~~~a~~pi~~Ni~~I~~~-~~~~~~~~~~~~~~~i~~la~g~~lg~~~q~l~~~~~l~k~g~~~~~~~~~~~~~~k~ 238 (241)
T Consensus 398 ~d~~tP~~~~~~~~~~n~~l~GlCy~~l~----~~l~~~G~a~a~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~l~~~ 472 (538)
T TIGR01695 398 KDTKTPFIVSVISVVLNVLLSGLCYLLLI----FPLGLSGIALATSLAAIVSAVLLYLRLKKRLKGIL-DIGVLKKLLKL 472 (538)
T ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-CHHHHHHHHHH
T ss_conf 30204899999999999999889999888----88736899999999999999999999865204776-13578999999