HHsearch alignment for GI: peg_476 and conserved domain: pfam03023
>pfam03023 MVIN MviN-like protein. Deletion of the mviN virulence gene in Salmonella enterica serovar. Typhimurium greatly reduces virulence in a mouse model of typhoid-like disease. Open reading frames encoding homologues of MviN have since been identified in a variety of bacteria, including pathogens and non-pathogens and plant-symbionts. In the nitrogen-fixing symbiont Rhizobium tropici, mviN is required for motility. The MviM protein is predicted to be membrane-associated.
Probab=99.75 E-value=1.5e-14 Score=97.80 Aligned_cols=209 Identities=12% Similarity=0.152 Sum_probs=172.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
Q ss_conf 99999999999999999999999999999957656799999999634999999986556677755899999985100799
Q 537021.9.peg.4 4 KLVRNFFTLVASESVNRCLGFVRASLMAAVFGVGKITDAFYTVAYVEFIFVRLAARGDGVIHNSFIPMFSQRREQNGSEN 83 (241)
Q Consensus 4 ~l~r~~~~i~~~tl~SrilGf~Re~~~A~~fGa~~~~DAf~~A~~iP~~l~~l~~~~~Gal~~~fIP~~~~~~~~~~~~~ 83 (241)
T Consensus 199 ~~~~l~~P~~l~~~~~qin-~lvd~~~AS~l~~G~vs-~l~yA~rl~~lP~gi~~v---ai~tv~~P~lS~~~~~~d~~~ 273 (452)
T pfam03023 199 RFLALALPTLLGVSVSQLN-LLIDTALASFLAEGSIS-YLYYADRIYQLPLGIFGV---SVSTVLLPRLSRHAKDGDWDE 273 (452)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHCCCCHHH-HHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHCCCHHH
T ss_conf 9999999999999999999-99999998735432799-999998887878999998---559988899999987689999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999987143321024763210246888999999999999989999999999999998689
Q 537021.9.peg.4 84 AWRLSSEVFSVLLPILMVMIMVIELVLPLLVRYVMAPGFPYQSDEYFLTVQLSRVVMPSIFFISLASLVTGILFASGRYF 163 (241)
Q Consensus 84 a~~~~~~~~~~~~~~~~~i~~l~~ifap~~v~~l~apGf~~~~~~~~la~~l~ri~~p~i~f~~l~~i~~~~L~a~~~F~ 163 (241)
T Consensus 274 ~~~~l~~~l~~~~~l~iPa~v~l~vl~~pIv~llf~rG-~F~~~~~~~ta~~L~~y~~gl~~~~l~~il~r~fyA~~dtk 352 (452)
T pfam03023 274 FLDLLDQAIRLTLLLMIPASFGLLVLSDPIVSVLYERG-AFSPEDVTATAGVLAAYALGLIPYALVKLLSRVFYAREDTK 352 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
T ss_conf 99999999999999999999999997899999998048-99999999999999999998899999999998858657858
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 98677788999999999999960465573168999999999999999999999999739877
Q 537021.9.peg.4 164 IACMPSMVIHILPIFVLTYALCYGSNMHKAEMIYLLCWGVFLAHAVYFWILYLSAKKSGVEL 225 (241)
Q Consensus 164 ~~a~~pi~~Ni~~I~~~~~~~~~~~~~~~~~~i~~la~g~~lg~~~q~l~~~~~l~k~g~~~ 225 (241)
T Consensus 353 tP~~~s~i~~~~ni~l~~~l~~-------~~g~~GlAlatsis~~v~~~ll~~~l~k~~~~~ 407 (452)
T pfam03023 353 TPFKISLISAVLNILLSLLLLP-------PLGVVGLALATSLSAWINLVFLYYILRKRLGGH 407 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 8999999999999999999999-------999999999999999999999999999865877