HHsearch results for GI: peg_476 and protein with PDBid: 3mkt_A
>3mkt_A Multi antimicrobial extrusion protein (Na(+)/drug antiporter) MATE-like MDR efflux...; multidrug transporter, cation-bound, transport protein; 3.65A {Vibrio cholerae} PDB: 3mku_A
Probab=99.39 E-value=7.7e-11 Score=76.29 Aligned_cols=195 Identities=10% Similarity=-0.037 Sum_probs=139.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
Q ss_conf 99999999999999999999995765679999999963499999998655667775589999998510079999999999
Q 537021.9.peg.4 12 LVASESVNRCLGFVRASLMAAVFGVGKITDAFYTVAYVEFIFVRLAARGDGVIHNSFIPMFSQRREQNGSENAWRLSSEV 91 (241)
Q Consensus 12 i~~~tl~SrilGf~Re~~~A~~fGa~~~~DAf~~A~~iP~~l~~l~~~~~Gal~~~fIP~~~~~~~~~~~~~a~~~~~~~ 91 (241)
........-..++.-...++..+|+ .+.++|.++.++-.+..... .+++++..|...+...+++.+++++.....
T Consensus 246 p~~~~~~~~~~~~~~~~~~~~~~g~-~~~aa~~i~~~i~~~~~~~~----~~l~~a~~~~vg~~~G~~~~~~~~~~~~~~ 320 (460)
T 3mkt_A 246 PVAAALFFEVTLFAVVALLVAPLGS-TVVAAHQVALNFSSLVFMFP----MSIGAAVSIRVGHKLGEQDTKGAAIAANVG 320 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCTTSS-HHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHSSCCCTTTTHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCC-CHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_conf 2788999999999999999872687-12259899999999999999----999999999999987277689999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999998714332102476321024688899999999999998999999999999999868998677788
Q 537021.9.peg.4 92 FSVLLPILMVMIMVIELVLPLLVRYVMAPGFPYQSDEYFLTVQLSRVVMPSIFFISLASLVTGILFASGRYFIACMPSMV 171 (241)
Q Consensus 92 ~~~~~~~~~~i~~l~~ifap~~v~~l~apGf~~~~~~~~la~~l~ri~~p~i~f~~l~~i~~~~L~a~~~F~~~a~~pi~ 171 (241)
+.+......++..+.+++.+++.. ++ .+|++..+++..++++..+..++.+++.+..+++|+-+|-..+....++
T Consensus 321 ~~~~~~~~~~~~~l~~~~~~~i~~-~f----~~d~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~ 395 (460)
T 3mkt_A 321 LMTGLATACITALLTVLFREQIAL-LY----TENQVVVALAMQLLLFAAIYQCMDAVQVVAAGSLRGYKDMTAIFHRTFI 395 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHT-CS----SCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGSTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HC----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_conf 984489999999999999999986-26----8989999999999999999999999999999999986748999999999
Q ss_pred HHH-HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999-999999999960465573168999999999999999999999
Q 537021.9.peg.4 172 IHI-LPIFVLTYALCYGSNMHKAEMIYLLCWGVFLAHAVYFWILYL 216 (241)
Q Consensus 172 ~Ni-~~I~~~~~~~~~~~~~~~~~~i~~la~g~~lg~~~q~l~~~~ 216 (241)
... +.+...++............++.+.-||..++..++.++...
T Consensus 396 ~~~~i~ip~~~~l~~~~~~~~~~~G~~Giw~~~~~~~~~~~~~~~~ 441 (460)
T 3mkt_A 396 SYWVLGLPTGYILGMTNWLTEQPLGAKGFWLGFIIGLSAAALMLGQ 441 (460)
T ss_dssp HHHHHHHHHHHHHHHHHTSSCCSSHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999852352446999999999999999999999