RPS-BLAST 2.2.22 [Sep-27-2009]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= 537021.9.peg.476_1
         (241 letters)



>d1aopa3 d.134.1.1 (A:149-345) Sulfite reductase hemoprotein
           (SiRHP), domains 2 and 4 {Escherichia coli [TaxId: 562]}
          Length = 197

 Score = 24.2 bits (52), Expect = 9.7
 Identities = 5/27 (18%), Positives = 13/27 (48%)

Query: 113 LVRYVMAPGFPYQSDEYFLTVQLSRVV 139
           + R V+    PY+S  +    + ++ +
Sbjct: 3   MNRNVLCTSNPYESQLHAEAYEWAKKI 29


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.334    0.144    0.439 

Gapped
Lambda     K      H
   0.267   0.0599    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 861,925
Number of extensions: 37526
Number of successful extensions: 115
Number of sequences better than 10.0: 1
Number of HSP's gapped: 115
Number of HSP's successfully gapped: 10
Length of query: 241
Length of database: 2,407,596
Length adjustment: 83
Effective length of query: 158
Effective length of database: 1,268,006
Effective search space: 200344948
Effective search space used: 200344948
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.6 bits)
S2: 52 (24.1 bits)