HHsearch alignment for GI: peg_477 and conserved domain: COG0534

>COG0534 NorM Na+-driven multidrug efflux pump [Defense mechanisms].
Probab=99.37  E-value=1.5e-10  Score=70.39  Aligned_cols=145  Identities=19%  Similarity=0.116  Sum_probs=126.7

Q ss_pred             CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             02677998899629789999999999999999999999999998899999997078988899877777899999999999
Q 537021.9.peg.4    2 AALLPKLSSAIQLENKQQSSELRNRAIEYVLFFGIPCTAILLMLPKEIIQTLYERGAFTAQDTILVSSYLSIYSTEIVGF   81 (235)
Q Consensus         2 ~allP~lS~~~~~~~~~~~~~~l~~~l~~~~~i~iP~~~gl~~l~~piv~~lf~~G~f~~~~~~~~~~~L~~~~~~l~~~   81 (235)
T Consensus       298 ~a~~~lvG~~~Ga~~~~~a~~~~~~~~~~~~~~~~~~~~i~~~~~~~i~~lf~~----~~~v~~~~~~~l~i~~~~~~~~  373 (455)
T COG0534         298 QAVTILVGQNLGAGNYKRARRAARLALKLSLLIALLIALLLLLFREPIISLFTT----DPEVIALAVILLLIAALFQPFD  373 (455)
T ss_pred             HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC----CHHHHHHHHHHHHHHHHHHHHH
T ss_conf             999999999877999999999999999999999999999999989999999789----4999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             65534457787766543345788999988-86432455310-12102313102799999999999999711
Q 537021.9.peg.4   82 LLSRVLLSEFYARNDVKTPAKFYILSIVM-GFVIAIGLFPF-IGGYGIATAEVSWVWVNTICLAVALLKRR  150 (235)
Q Consensus        82 ~l~~il~~~~ya~~~~~~p~~~~~i~~ii-ni~l~~~li~~-~g~~G~a~at~is~~v~~~il~~~l~k~~  150 (235)
T Consensus       374 ~~~~~~~g~lrg~g~~~~~~~~~~~~~~~~~lp~~~~l~~~~~g~~Gvw~~~~~~~~~~~~~~~~~~~~~~  444 (455)
T COG0534         374 GIQFVLSGVLRGAGDAKIPFIISLLSYWGFRLPLAYLLGFFFLGLAGVWIGFPLSLILRAILLLLRLRRGR  444 (455)
T ss_pred             HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999975258719989999999999999999999888417427669999999999999999999998