HHsearch alignment for GI: peg_477 and conserved domain: COG0728
>COG0728 MviN Uncharacterized membrane protein, putative virulence factor [General function prediction only].
Probab=99.14 E-value=1.6e-07 Score=55.41 Aligned_cols=182 Identities=16% Similarity=0.116 Sum_probs=134.6
Q ss_pred CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 02677998899629789999999999999999999999999998899999997078988899877777899999999999
Q 537021.9.peg.4 2 AALLPKLSSAIQLENKQQSSELRNRAIEYVLFFGIPCTAILLMLPKEIIQTLYERGAFTAQDTILVSSYLSIYSTEIVGF 81 (235)
Q Consensus 2 ~allP~lS~~~~~~~~~~~~~~l~~~l~~~~~i~iP~~~gl~~l~~piv~~lf~~G~f~~~~~~~~~~~L~~~~~~l~~~ 81 (235)
T Consensus 68 ~aFVPv~~~~~~~~~~~~~~~f~~~v~~~l~~~ll~vt~L~~l~~p~iv~~~~~~g~-~~~~~~~a~~l~~i~~Pyl~~i 146 (518)
T COG0728 68 SAFVPVLAEAKKKEGEEAARFFSRLVTGLLTLVLLLVTLLGILFAPWLVRLLLAPGF-DETDKFLAVLLTRILFPYLLFI 146 (518)
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-CHHHHHHHHHHHHHHHHHHHHH
T ss_conf 666678999987060557999999999999999999999999988999999717897-5156899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHHHHCC-----CCC
Q ss_conf 655344577877665433457889999888643245531012--1023131027999999999999997113-----666
Q 537021.9.peg.4 82 LLSRVLLSEFYARNDVKTPAKFYILSIVMGFVIAIGLFPFIG--GYGIATAEVSWVWVNTICLAVALLKRRQ-----IDL 154 (235)
Q Consensus 82 ~l~~il~~~~ya~~~~~~p~~~~~i~~iini~l~~~li~~~g--~~G~a~at~is~~v~~~il~~~l~k~~~-----~~~ 154 (235)
T Consensus 147 sL~al~~aiLNs~~~F~~~a~aPvl~Nv~~I~~~l~~~~~~~~~~~~La~gvl~Gg~~Q~l~~lp~l~~~g~~~~p~~~~ 226 (518)
T COG0728 147 SLSALFGAILNSRNRFFIPAFAPVLLNVSVIGLALFLGPYFDPPLLALAWGVLIGGLLQLLVQLPALRKAGLLIKPRFGF 226 (518)
T ss_pred HHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 99999999984037212044649999999999999854100047899999999999999999999999836544787888
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 6889999999999999999999999998643
Q 537021.9.peg.4 155 PFQTIYRILSIFISSGLMGMFIVFFKPCLFN 185 (235)
Q Consensus 155 ~~~~~~~~~k~~~as~im~~~~~~~~~~~~~ 185 (235)
T Consensus 227 ~~~~lk~~~~~~~p~~l~-~sisQi~lli~~ 256 (518)
T COG0728 227 KDPGLKRFLKLMLPALLG-VSISQINLLIDT 256 (518)
T ss_pred CCHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
T ss_conf 715599999999999999-999999999999