HHsearch alignment for GI: peg_477 and conserved domain: PRK01766
>PRK01766 multidrug efflux protein; Reviewed.
Probab=99.91 E-value=2.1e-21 Score=124.42 Aligned_cols=167 Identities=17% Similarity=0.238 Sum_probs=143.7
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 67799889962978999999999999999999999999999889999999707898889987777789999999999965
Q 537021.9.peg.4 4 LLPKLSSAIQLENKQQSSELRNRAIEYVLFFGIPCTAILLMLPKEIIQTLYERGAFTAQDTILVSSYLSIYSTEIVGFLL 83 (235)
Q Consensus 4 llP~lS~~~~~~~~~~~~~~l~~~l~~~~~i~iP~~~gl~~l~~piv~~lf~~G~f~~~~~~~~~~~L~~~~~~l~~~~l 83 (235)
T Consensus 68 ~~~lvsq~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~l~-g---~~~~v~~~a~~Yl~i~~~~~~~~~~ 143 (452)
T PRK01766 68 LTPIVAQLNGAGRRERIAHQVRQGLWLALFLSVLIMLVLYNAVPPILNMM-N---LEPDVADIAVGYLHALLWGIPAYLL 143 (452)
T ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-C---CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999789988999999999999999999999999999999999981-9---8299999999999999987899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC------
Q ss_conf 5344577877665433457889999888643245531------0121023131027999999999999997113------
Q 537021.9.peg.4 84 SRVLLSEFYARNDVKTPAKFYILSIVMGFVIAIGLFP------FIGGYGIATAEVSWVWVNTICLAVALLKRRQ------ 151 (235)
Q Consensus 84 ~~il~~~~ya~~~~~~p~~~~~i~~iini~l~~~li~------~~g~~G~a~at~is~~v~~~il~~~l~k~~~------ 151 (235)
T Consensus 144 ~~~~~~~l~~~g~t~~~m~~~~~~~ilNi~l~~~lIfG~~g~p~lGv~GaA~At~is~~~~~~~~~~~~~~~~~~~~~~~ 223 (452)
T PRK01766 144 YQVLRSFIDGLGKTKPTMVIGFLGLLVNIPLNYIFIYGKFGFPELGGVGCGVATAIVYWVMFLAMLIYIKRARRFRDFRL 223 (452)
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCC
T ss_conf 99999998847984999999999999999888898760357630068899999999999999999999998455002000
Q ss_pred ----CCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf ----66668899999999999999999
Q 537021.9.peg.4 152 ----IDLPFQTIYRILSIFISSGLMGM 174 (235)
Q Consensus 152 ----~~~~~~~~~~~~k~~~as~im~~ 174 (235)
T Consensus 224 ~~~~~~~~~~~~~~i~~ig~P~~~~~~ 250 (452)
T PRK01766 224 FKGLYKPDWAVIKRLLKLGLPIGLAIF 250 (452)
T ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 021032349999999997328999999