HHsearch alignment for GI: peg_477 and conserved domain: PRK01766
>PRK01766 multidrug efflux protein; Reviewed.
Probab=99.50 E-value=6.5e-12 Score=77.19 Aligned_cols=145 Identities=14% Similarity=0.116 Sum_probs=128.1
Q ss_pred CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 02677998899629789999999999999999999999999998899999997078988899877777899999999999
Q 537021.9.peg.4 2 AALLPKLSSAIQLENKQQSSELRNRAIEYVLFFGIPCTAILLMLPKEIIQTLYERGAFTAQDTILVSSYLSIYSTEIVGF 81 (235)
Q Consensus 2 ~allP~lS~~~~~~~~~~~~~~l~~~l~~~~~i~iP~~~gl~~l~~piv~~lf~~G~f~~~~~~~~~~~L~~~~~~l~~~ 81 (235)
T Consensus 293 ~a~~~~vg~~~Ga~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-lft~---d~~v~~~~~~~l~~~~~~~~~~ 368 (452)
T PRK01766 293 MALTIRVGFELGAGRYLDARQAAYIGLAVGLAMALLTAILLVLFREQIAL-LYTD---DPEVIALASHLLLFAALFQFSD 368 (452)
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCC---CHHHHHHHHHHHHHHHHHHHHH
T ss_conf 88989999997499999999999999999999999999999997787877-4599---8999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 655344577877665433457889999-888643245531--012102313102799999999999999711
Q 537021.9.peg.4 82 LLSRVLLSEFYARNDVKTPAKFYILSI-VMGFVIAIGLFP--FIGGYGIATAEVSWVWVNTICLAVALLKRR 150 (235)
Q Consensus 82 ~l~~il~~~~ya~~~~~~p~~~~~i~~-iini~l~~~li~--~~g~~G~a~at~is~~v~~~il~~~l~k~~ 150 (235)
T Consensus 369 ~~~~v~~g~lrg~G~t~~~~~~~~~~~w~i~iPl~~ll~~~~~~G~~GiW~~~~~~~~~~~~~~~~r~r~~~ 440 (452)
T PRK01766 369 AIQVIGSGALRGYKDTRVIFFITFIAYWVIGLPLGYILALTDPMGPFGFWIGLIIGLTAAAILLLLRLRKLQ 440 (452)
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999895564599999999999999999999999986687578999999999999999999999987