HHsearch alignment for GI: peg_477 and conserved domain: PRK09575

>PRK09575 vmrA multidrug efflux pump VmrA; Reviewed.
Probab=99.60  E-value=2.3e-13  Score=84.39  Aligned_cols=143  Identities=13%  Similarity=0.062  Sum_probs=124.3

Q ss_pred             CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             02677998899629789999999999999999999999999998899999997078988899877777899999999999
Q 537021.9.peg.4    2 AALLPKLSSAIQLENKQQSSELRNRAIEYVLFFGIPCTAILLMLPKEIIQTLYERGAFTAQDTILVSSYLSIYSTEIVGF   81 (235)
Q Consensus         2 ~allP~lS~~~~~~~~~~~~~~l~~~l~~~~~i~iP~~~gl~~l~~piv~~lf~~G~f~~~~~~~~~~~L~~~~~~l~~~   81 (235)
T Consensus       295 ~a~~~lvg~n~GA~~~~rv~~~~~~~~~~~~~~~~~~~~l~~~f~~~l~~l-F~--~~d~~vi~~~~~~l~i~~~~~~~~  371 (456)
T PRK09575        295 EGMQPPVSYYFGARQYDNIKKLLKLAMKVSVIAGIAWVLLLNLFPETMVSL-FN--SGDPELIAETIVGIRLHLFAMFLD  371 (456)
T ss_pred             HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HC--CCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             878999999856998899999999999999999999999999999999987-56--998899999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             655344577877665433457889999888643245531012102313102799999999999999
Q 537021.9.peg.4   82 LLSRVLLSEFYARNDVKTPAKFYILSIVMGFVIAIGLFPFIGGYGIATAEVSWVWVNTICLAVALL  147 (235)
Q Consensus        82 ~l~~il~~~~ya~~~~~~p~~~~~i~~iini~l~~~li~~~g~~G~a~at~is~~v~~~il~~~l~  147 (235)
T Consensus       372 g~~~v~~~~f~a~g~~~~~~~~sl~~~~i~lp~~~il~~~~G~~GiW~a~~is~~~~~~~~~~~~~  437 (456)
T PRK09575        372 GFLVLASAYFMAVNQGGKALFISIGNMLIQLPFLFILPKWLGIDGVWLAMPLSNIALSLVVAPMLW  437 (456)
T ss_pred             HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             999999999988799499999999999999999999999981759999999999999999999999