HHsearch alignment for GI: peg_477 and conserved domain: PRK09575
>PRK09575 vmrA multidrug efflux pump VmrA; Reviewed.
Probab=99.60 E-value=2.3e-13 Score=84.39 Aligned_cols=143 Identities=13% Similarity=0.062 Sum_probs=124.3
Q ss_pred CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 02677998899629789999999999999999999999999998899999997078988899877777899999999999
Q 537021.9.peg.4 2 AALLPKLSSAIQLENKQQSSELRNRAIEYVLFFGIPCTAILLMLPKEIIQTLYERGAFTAQDTILVSSYLSIYSTEIVGF 81 (235)
Q Consensus 2 ~allP~lS~~~~~~~~~~~~~~l~~~l~~~~~i~iP~~~gl~~l~~piv~~lf~~G~f~~~~~~~~~~~L~~~~~~l~~~ 81 (235)
T Consensus 295 ~a~~~lvg~n~GA~~~~rv~~~~~~~~~~~~~~~~~~~~l~~~f~~~l~~l-F~--~~d~~vi~~~~~~l~i~~~~~~~~ 371 (456)
T PRK09575 295 EGMQPPVSYYFGARQYDNIKKLLKLAMKVSVIAGIAWVLLLNLFPETMVSL-FN--SGDPELIAETIVGIRLHLFAMFLD 371 (456)
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HC--CCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 878999999856998899999999999999999999999999999999987-56--998899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 655344577877665433457889999888643245531012102313102799999999999999
Q 537021.9.peg.4 82 LLSRVLLSEFYARNDVKTPAKFYILSIVMGFVIAIGLFPFIGGYGIATAEVSWVWVNTICLAVALL 147 (235)
Q Consensus 82 ~l~~il~~~~ya~~~~~~p~~~~~i~~iini~l~~~li~~~g~~G~a~at~is~~v~~~il~~~l~ 147 (235)
T Consensus 372 g~~~v~~~~f~a~g~~~~~~~~sl~~~~i~lp~~~il~~~~G~~GiW~a~~is~~~~~~~~~~~~~ 437 (456)
T PRK09575 372 GFLVLASAYFMAVNQGGKALFISIGNMLIQLPFLFILPKWLGIDGVWLAMPLSNIALSLVVAPMLW 437 (456)
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999988799499999999999999999999999981759999999999999999999999