HHsearch alignment for GI: peg_477 and conserved domain: TIGR01695

>TIGR01695 mviN integral membrane protein MviN; InterPro: IPR004268 The sequencing of a number of pathogenic bacterial genomes has led to novel virulence proteins being discovered that are yet to be biochemically characterised. One example is the MviN family of proteins, first described in Salmonella , and conserved across a wide variety of pathogens in both animals and plants. Further work on these proteins of as yet unknown function has revealed they are integral membrane molecules, and are part of an operon essential in at least one species . ; GO: 0009405 pathogenesis, 0016021 integral to membrane.
Probab=99.00  E-value=6.8e-07  Score=52.26  Aligned_cols=183  Identities=16%  Similarity=0.139  Sum_probs=142.7

Q ss_pred             CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH---HHHHHHHHHHHHHHH
Q ss_conf             02677998899629789999999999999999999999999998899999997078988899---877777899999999
Q 537021.9.peg.4    2 AALLPKLSSAIQLENKQQSSELRNRAIEYVLFFGIPCTAILLMLPKEIIQTLYERGAFTAQD---TILVSSYLSIYSTEI   78 (235)
Q Consensus         2 ~allP~lS~~~~~~~~~~~~~~l~~~l~~~~~i~iP~~~gl~~l~~piv~~lf~~G~f~~~~---~~~~~~~L~~~~~~l   78 (235)
T Consensus        63 ~aFvP~f~~~~~~~g~~~~~~~f~~~~~~l~~~~~~l~~~~~~~~a~~~~~l~a~g~~~~~~~nk~~~a~~l~~~~~pyl  142 (538)
T TIGR01695        63 SAFVPVFKKAKKKEGEKEARRAFAEKVLTLLILVLLLVVLLGIFFAPIVISLLAPGLFADDAANKFSLAVSLLRITFPYL  142 (538)
T ss_pred             HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf             88999999999615557888999999999999999999999999788899731764357402458999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH------------HHHHHHHHHHHHHHHHHH
Q ss_conf             99965534457787766543345788999988864324553101210231------------310279999999999999
Q 537021.9.peg.4   79 VGFLLSRVLLSEFYARNDVKTPAKFYILSIVMGFVIAIGLFPFIGGYGIA------------TAEVSWVWVNTICLAVAL  146 (235)
Q Consensus        79 ~~~~l~~il~~~~ya~~~~~~p~~~~~i~~iini~l~~~li~~~g~~G~a------------~at~is~~v~~~il~~~l  146 (235)
T Consensus       143 ~l~sL~~~~~~~Ln~~~~F~~ps~~P~l~N~~~I~~l~~~~~~~~~~~~~g~~~~~~~~LL~~gvl~GG~~Q~l~~~~~l  222 (538)
T TIGR01695       143 LLISLAAVFGAILNARERFFIPSFSPVLFNISVIVSLLFLDVSLGQLALAGMYLALIELLLAIGVLIGGVAQLLIQLPAL  222 (538)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999997755552567999999999999999998630124666678999999999999999999999999997


Q ss_pred             HHHC--------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             9711--------36666889999999999999999999999998643
Q 537021.9.peg.4  147 LKRR--------QIDLPFQTIYRILSIFISSGLMGMFIVFFKPCLFN  185 (235)
Q Consensus       147 ~k~~--------~~~~~~~~~~~~~k~~~as~im~~~~~~~~~~~~~  185 (235)
T Consensus       223 ~~~G~R~~~~~prf~~~~~~l~~~l~~~~p~-~lg~s~~q~~~l~~t  268 (538)
T TIGR01695       223 RKAGIRGLLLKPRFNFRDPGLKRFLKLMLPT-TLGVSASQITLLINT  268 (538)
T ss_pred             HCCCCHHHHHHHCCCCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
T ss_conf             1067303553101033545899999999999-999999999999999