HHsearch alignment for GI: peg_477 and conserved domain: TIGR02900
>TIGR02900 spore_V_B stage V sporulation protein B; InterPro: IPR014249 This entry represents SpoVB, which is the stage V sporulation protein B of the bacterial endospore formation program in Bacillus subtilis and various other Firmcutes. It is nearly universal among endospore-formers. Paralogs with high sequence similarity to SpoVB exist, such as YkvU from B. subtilis and a number Clostridium proteins, but they are excluded from this entry. .
Probab=99.91 E-value=8.4e-22 Score=126.36 Aligned_cols=195 Identities=19% Similarity=0.283 Sum_probs=155.7
Q ss_pred CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 02677998899629789999999999999999999999999998899999997-07898889987777789999999999
Q 537021.9.peg.4 2 AALLPKLSSAIQLENKQQSSELRNRAIEYVLFFGIPCTAILLMLPKEIIQTLY-ERGAFTAQDTILVSSYLSIYSTEIVG 80 (235)
Q Consensus 2 ~allP~lS~~~~~~~~~~~~~~l~~~l~~~~~i~iP~~~gl~~l~~piv~~lf-~~G~f~~~~~~~~~~~L~~~~~~l~~ 80 (235)
T Consensus 294 T~LvP~iSEa~~kk~y~~~~~Ri~qa~risll~G~~~~~I~l~~p~~l~~L~yP~~--------~~~g~fi~~~a~~~pf 365 (493)
T TIGR02900 294 TALVPDISEAMAKKNYSLVEKRINQALRISLLLGLITTVILLVIPDELGKLFYPGR--------PDAGNFIRVLAPSFPF 365 (493)
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC--------CCHHHHHHHHHHHHHH
T ss_conf 98778899875535468999999999999999999999999997667764158998--------5388899999988999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
Q ss_conf 965534457787766543345788999988864324553--101210231310279999999999999971136666889
Q 537021.9.peg.4 81 FLLSRVLLSEFYARNDVKTPAKFYILSIVMGFVIAIGLF--PFIGGYGIATAEVSWVWVNTICLAVALLKRRQIDLPFQT 158 (235)
Q Consensus 81 ~~l~~il~~~~ya~~~~~~p~~~~~i~~iini~l~~~li--~~~g~~G~a~at~is~~v~~~il~~~l~k~~~~~~~~~~ 158 (235)
T Consensus 366 ~Y~~~~~~siL~gLg~~~~~l~NSlI~~iv~~~~lf~Lt~~P~i~I~G~a~~~~~~~~l~~~Ln~~~~~K~~~i~i~~~~ 445 (493)
T TIGR02900 366 LYLSAPLQSILQGLGKQKVALRNSLIGAIVKIILLFVLTSIPSINIYGYALTIIITSVLVLVLNLAEIKKNIRITIDLSE 445 (493)
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECHHH
T ss_conf 99889999999731544699999999999999999999853046789999999999999999869987655221511567
Q ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999-9999999999998643202210599999999999999999999
Q 537021.9.peg.4 159 IYRILSIFISS-GLMGMFIVFFKPCLFNQLSAETAFSPFKNLAIILSGAVLVYLC 212 (235)
Q Consensus 159 ~~~~~k~~~as-~im~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~y~~ 212 (235)
T Consensus 446 ~--v~kP~~~l~~~l~~~~l~~~~~~----~~--~~~~~~~~~~~i~~~~~~Y~~ 492 (493)
T TIGR02900 446 F--VLKPIFALLGILVYLILSLLKYI----IF--NVNILINLLLIIILGFSIYIL 492 (493)
T ss_pred H--HHHHHHHHHHHHHHHHHHHHHHH----HC--CHHHHHHHHHHHHHHHHHHHH
T ss_conf 6--87379999999999999988874----04--534679999999999999982