Query 537021.9.peg.493_1
Match_columns 64
No_of_seqs 1 out of 3
Neff 1.0
Searched_HMMs 13730
Date Tue May 24 22:39:52 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i peg_493.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ng7a_ a.178.1.1 (A:) Soluble 8.5 58 0.0042 12.6 1.1 12 43-54 31-42 (60)
2 d1w3ex1 d.79.3.1 (X:1-98) Euka 7.4 70 0.0051 12.2 1.2 15 42-56 45-59 (98)
3 d2hdca_ a.4.5.14 (A:) Genesis 4.9 98 0.0071 11.4 0.8 28 20-49 10-39 (97)
4 d1kq8a_ a.4.5.14 (A:) HFH-1 (H 4.6 78 0.0057 11.9 0.0 28 20-49 4-33 (75)
5 d1rg6a_ a.60.1.2 (A:) C-termin 4.1 60 0.0044 12.5 -0.9 30 4-33 18-54 (67)
6 d2bo1a1 d.79.3.1 (A:1-100) Euk 2.8 1.5E+02 0.011 10.3 1.2 14 43-56 46-59 (100)
7 d2c5lc1 d.15.1.5 (C:2134-2239) 2.5 1.7E+02 0.012 10.1 0.8 14 18-31 29-42 (106)
8 d1d5va_ a.4.5.14 (A:) Adipocyt 2.5 1.7E+02 0.012 10.1 0.6 28 20-49 12-41 (94)
9 d2c6ya1 a.4.5.14 (A:1-98) Inte 2.5 1.7E+02 0.012 10.1 0.4 22 20-41 11-34 (98)
10 d1u97a_ a.17.1.2 (A:) Cytochro 2.4 1.7E+02 0.013 10.0 1.3 8 28-35 53-60 (69)
No 1
>d1ng7a_ a.178.1.1 (A:) Soluble domain of poliovirus core protein 3a {Poliovirus type 1, strain Mahoney [TaxId: 12080]}
Probab=8.50 E-value=58 Score=12.64 Aligned_cols=12 Identities=25% Similarity=0.783 Sum_probs=9.5
Q ss_pred HHHHHHHHHHCC
Q ss_conf 999999962142
Q 537021.9.peg.4 43 IEEIKYYCKEAN 54 (64)
Q Consensus 43 ieeikyyckean 54 (64)
-||+.-|||+.+
T Consensus 31 SeEVReYCk~kg 42 (60)
T d1ng7a_ 31 SQEVRDYCEKKG 42 (60)
T ss_dssp CHHHHHHHHHHT
T ss_pred CHHHHHHHHHCC
T ss_conf 599999999779
No 2
>d1w3ex1 d.79.3.1 (X:1-98) Eukaryotic ribosomal protein L30 (L30e) {Archaeon Thermococcus celer [TaxId: 2264]}
Probab=7.37 E-value=70 Score=12.19 Aligned_cols=15 Identities=33% Similarity=0.649 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHCCHH
Q ss_conf 999999996214234
Q 537021.9.peg.4 42 WIEEIKYYCKEANIV 56 (64)
Q Consensus 42 wieeikyyckeaniv 56 (64)
-.+++.++|++.||-
T Consensus 45 ~~~~i~~~c~~~~Ip 59 (98)
T d1w3ex1 45 IKEDIEYYARLSGIA 59 (98)
T ss_dssp HHHHHHHHHHHHTCE
T ss_pred HHHHHHHHHHHCCCC
T ss_conf 999999999846999
No 3
>d2hdca_ a.4.5.14 (A:) Genesis {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=4.93 E-value=98 Score=11.39 Aligned_cols=28 Identities=32% Similarity=0.643 Sum_probs=17.1
Q ss_pred HHHHHHHH--HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999--8768999999999999999999
Q 537021.9.peg.4 20 IISMAICK--AHRNCIRGIISWIIWIEEIKYY 49 (64)
Q Consensus 20 iismaick--ahrncirgiiswiiwieeikyy 49 (64)
+|.|||.. .++-.++.|-+||- +...||
T Consensus 10 LI~~Ai~~sp~~~ltL~eIY~~i~--~~fpyf 39 (97)
T d2hdca_ 10 LITMAILQSPQKKLTLSGICEFIS--NRFPYY 39 (97)
T ss_dssp HHHHHHHTCTTTCBCHHHHHHHHH--HHCHHH
T ss_pred HHHHHHHHCCCCCCCHHHHHHHHH--HHCCCC
T ss_conf 999999869876842999999999--868445
No 4
>d1kq8a_ a.4.5.14 (A:) HFH-1 (HNF-3 forkhead homolog-1) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=4.60 E-value=78 Score=11.92 Aligned_cols=28 Identities=21% Similarity=0.494 Sum_probs=17.1
Q ss_pred HHHHHHHHH--HHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999998--768999999999999999999
Q 537021.9.peg.4 20 IISMAICKA--HRNCIRGIISWIIWIEEIKYY 49 (64)
Q Consensus 20 iismaicka--hrncirgiiswiiwieeikyy 49 (64)
+|.|||-.+ ++-.++.|..||- +...||
T Consensus 4 LI~~Ai~~sp~~~ltL~eIy~~i~--~~fpy~ 33 (75)
T d1kq8a_ 4 LITMAIRDSAGGRLTLAEINEYLM--GKFPFF 33 (75)
T ss_dssp HHHHHHTTSSSSCBCHHHHHHHHH--HHCTTG
T ss_pred HHHHHHHHCCCCCCCHHHHHHHHH--HHCCCC
T ss_conf 999999859888840999999999--848233
No 5
>d1rg6a_ a.60.1.2 (A:) C-terminal domain of p63 {Human (Homo sapiens) [TaxId: 9606]}
Probab=4.11 E-value=60 Score=12.54 Aligned_cols=30 Identities=23% Similarity=0.444 Sum_probs=21.0
Q ss_pred HHHHHHCCCHHHHH-------HHHHHHHHHHHHHHHH
Q ss_conf 03333204089999-------9999999999876899
Q 537021.9.peg.4 4 KIDYFASSNIFIMI-------GMIISMAICKAHRNCI 33 (64)
Q Consensus 4 kidyfassnifimi-------gmiismaickahrnci 33 (64)
-||||.+.|++-|. .-.-+|.|-..|||-|
T Consensus 18 ~id~F~~q~l~~v~qLe~~sleDL~~mkIp~~~r~~I 54 (67)
T d1rg6a_ 18 CLDYFTTQGLTTIYQIEHYSMDDLASLKIPEQFRHAI 54 (67)
T ss_dssp SHHHHHHHTCCSGGGGSSCCHHHHHTTTCCTHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHCCHHHHHCCCCCHHHHHHH
T ss_conf 9999998252069998616898887076748888888
No 6
>d2bo1a1 d.79.3.1 (A:1-100) Eukaryotic ribosomal protein L30 (L30e) {Archaeon Thermococcus celer [TaxId: 2264]}
Probab=2.80 E-value=1.5e+02 Score=10.32 Aligned_cols=14 Identities=21% Similarity=0.555 Sum_probs=11.1
Q ss_pred HHHHHHHHHHCCHH
Q ss_conf 99999996214234
Q 537021.9.peg.4 43 IEEIKYYCKEANIV 56 (64)
Q Consensus 43 ieeikyyckeaniv 56 (64)
.+++.++|++.++.
T Consensus 46 ~~~i~~~c~~~~vp 59 (100)
T d2bo1a1 46 KEDLEYYARLSGTP 59 (100)
T ss_dssp HHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHCCCC
T ss_conf 99999999846997
No 7
>d2c5lc1 d.15.1.5 (C:2134-2239) Phospholipase C-epsilon-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=2.55 E-value=1.7e+02 Score=10.14 Aligned_cols=14 Identities=29% Similarity=0.536 Sum_probs=10.7
Q ss_pred HHHHHHHHHHHHHH
Q ss_conf 99999999998768
Q 537021.9.peg.4 18 GMIISMAICKAHRN 31 (64)
Q Consensus 18 gmiismaickahrn 31 (64)
--++.+|.+||.|+
T Consensus 29 ~dvl~qaL~kA~~~ 42 (106)
T d2c5lc1 29 QDVIQQTLCKAKYS 42 (106)
T ss_dssp HHHHHHHHHHTTTS
T ss_pred HHHHHHHHHHCCCC
T ss_conf 99999999973676
No 8
>d1d5va_ a.4.5.14 (A:) Adipocyte-transcription factor FREAC-11 (s12, fkh-14) {Human (Homo sapiens) [TaxId: 9606]}
Probab=2.53 E-value=1.7e+02 Score=10.12 Aligned_cols=28 Identities=29% Similarity=0.680 Sum_probs=17.0
Q ss_pred HHHHHHHH--HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999--8768999999999999999999
Q 537021.9.peg.4 20 IISMAICK--AHRNCIRGIISWIIWIEEIKYY 49 (64)
Q Consensus 20 iismaick--ahrncirgiiswiiwieeikyy 49 (64)
+|.|||-. .++-.++.|-.|| -+.-.||
T Consensus 12 LI~~AI~~sp~~~ltL~eIY~~i--~~~fpyf 41 (94)
T d1d5va_ 12 LITMAIQNAPEKKITLNGIYQFI--MDRFPFY 41 (94)
T ss_dssp HHHHHHHTCSSSSBCHHHHHHHH--HHHCTHH
T ss_pred HHHHHHHHCCCCCCCHHHHHHHH--HHHCCCC
T ss_conf 99999985988886399999999--9978766
No 9
>d2c6ya1 a.4.5.14 (A:1-98) Interleukin enhancer binding factor {Human (Homo sapiens) [TaxId: 9606]}
Probab=2.45 E-value=1.7e+02 Score=10.07 Aligned_cols=22 Identities=27% Similarity=0.376 Sum_probs=14.2
Q ss_pred HHHHHHHH--HHHHHHHHHHHHHH
Q ss_conf 99999999--87689999999999
Q 537021.9.peg.4 20 IISMAICK--AHRNCIRGIISWII 41 (64)
Q Consensus 20 iismaick--ahrncirgiiswii 41 (64)
+|.|||.. .++-.++.|-.||.
T Consensus 11 LI~~Ai~~sp~~~ltL~eIy~~i~ 34 (98)
T d2c6ya1 11 LIVQAITMAPDKQLTLNGIYTHIT 34 (98)
T ss_dssp HHHHHHHTSTTSCEEHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCCHHHHHHHHH
T ss_conf 999999859888840999999999
No 10
>d1u97a_ a.17.1.2 (A:) Cytochrome C oxidase copper chaperone, COX17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=2.41 E-value=1.7e+02 Score=10.04 Aligned_cols=8 Identities=25% Similarity=1.011 Sum_probs=0.0
Q ss_pred HHHHHHHH
Q ss_conf 87689999
Q 537021.9.peg.4 28 AHRNCIRG 35 (64)
Q Consensus 28 ahrncirg 35 (64)
+|+.|.||
T Consensus 53 ahk~CMr~ 60 (69)
T d1u97a_ 53 KYKECMKG 60 (69)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
T ss_conf 99999997
Done!