Query         537021.9.peg.523_1
Match_columns 38
No_of_seqs    1 out of 3
Neff          1.0 
Searched_HMMs 13730
Date          Tue May 24 21:56:46 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i peg_523.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d2es9a1 a.247.1.1 (A:11-107) H  12.9      34  0.0025   15.3   1.2   11    9-19      2-12  (97)
  2 d1vpua_ g.34.1.1 (A:) HIV-1 VP   8.7      67  0.0049   13.9   1.5   15    2-16      3-17  (45)
  3 d1v7mv_ a.26.1.2 (V:) Thrombop   8.6      48  0.0035   14.6   0.7   10   20-29    124-133 (145)
  4 d1eera_ a.26.1.2 (A:) Erythrop   8.2      56  0.0041   14.3   0.9   13   20-32    144-156 (166)
  5 d1k8ta_ e.41.1.1 (A:) Adenylyl   7.5      76  0.0056   13.6   1.3   17   11-27      9-25  (509)
  6 d1efaa1 a.35.1.5 (A:2-60) Lac    4.8 1.2E+02  0.0084   12.7   1.0   19    9-27     36-54  (59)
  7 d2hsga1 a.35.1.5 (A:2-58) Gluc   4.4 1.3E+02  0.0095   12.4   1.0   20    8-27     34-53  (57)
  8 d1qpza1 a.35.1.5 (A:2-58) Puri   4.4 1.3E+02  0.0096   12.4   1.0   20    8-27     33-52  (57)
  9 d1q15a1 c.26.2.1 (A:206-501) b   4.0 1.2E+02  0.0089   12.5   0.7   19    7-25    216-234 (296)
 10 d2pk8a1 d.274.1.1 (A:2-95) Hyp   3.8 1.2E+02  0.0089   12.6   0.5   25    6-30      9-36  (94)

No 1  
>d2es9a1 a.247.1.1 (A:11-107) Hypothetical protein YoaC {Salmonella typhimurium [TaxId: 90371]}
Probab=12.91  E-value=34  Score=15.34  Aligned_cols=11  Identities=45%  Similarity=0.733  Sum_probs=7.7

Q ss_pred             HHHHHHHHHHH
Q ss_conf             99866655311
Q 537021.9.peg.5    9 VIDRALDMTGY   19 (38)
Q Consensus         9 vidraldmtgy   19 (38)
                      |||.|||..|-
T Consensus         2 vIdKALDFIg~   12 (97)
T d2es9a1           2 AIEKALDFIGG   12 (97)
T ss_dssp             HHHHHHHHHHT
T ss_pred             HHHHHHHHHCC
T ss_conf             06788887403


No 2  
>d1vpua_ g.34.1.1 (A:) HIV-1 VPU cytoplasmic domain {Human immunodeficiency virus type 1 [TaxId: 11676]}
Probab=8.70  E-value=67  Score=13.85  Aligned_cols=15  Identities=40%  Similarity=0.678  Sum_probs=12.8

Q ss_pred             HHHHHHHHHHHHHHH
Q ss_conf             889999999866655
Q 537021.9.peg.5    2 LDKLIKGVIDRALDM   16 (38)
Q Consensus         2 ldklikgvidraldm   16 (38)
                      .|+||+-.+.||-|-
T Consensus         3 IdrLi~RIrERAEDS   17 (45)
T d1vpua_           3 IDRLIDRITERAEDS   17 (45)
T ss_dssp             HHHHHHHHHHTTCHH
T ss_pred             HHHHHHHHHHHCCCC
T ss_conf             899999999870257


No 3  
>d1v7mv_ a.26.1.2 (V:) Thrombopoietin {Human (Homo sapiens) [TaxId: 9606]}
Probab=8.58  E-value=48  Score=14.60  Aligned_cols=10  Identities=70%  Similarity=0.909  Sum_probs=6.2

Q ss_pred             HHHHHHHHHH
Q ss_conf             0577651346
Q 537021.9.peg.5   20 VPSHLLRGKV   29 (38)
Q Consensus        20 vpshllrgkv   29 (38)
                      +-+++||||+
T Consensus       124 v~~nfLRGKv  133 (145)
T d1v7mv_         124 SFQHLLRGKV  133 (145)
T ss_dssp             HHHHHHHTTT
T ss_pred             HHHHHHHHHH
T ss_conf             9999985668


No 4  
>d1eera_ a.26.1.2 (A:) Erythropoietin {Human (Homo sapiens) [TaxId: 9606]}
Probab=8.21  E-value=56  Score=14.25  Aligned_cols=13  Identities=54%  Similarity=0.669  Sum_probs=7.7

Q ss_pred             HHHHHHHHHHHHH
Q ss_conf             0577651346545
Q 537021.9.peg.5   20 VPSHLLRGKVFGY   32 (38)
Q Consensus        20 vpshllrgkvfgy   32 (38)
                      +-+.+|||||-=|
T Consensus       144 v~~nfLRGKvrll  156 (166)
T d1eera_         144 VYSNFLRGKLKLY  156 (166)
T ss_dssp             HHHHHHHTHHHHH
T ss_pred             HHHHHHHHHHHHH
T ss_conf             9999985679986


No 5  
>d1k8ta_ e.41.1.1 (A:) Adenylylcyclase toxin (the edema factor) {Bacillus anthracis [TaxId: 1392]}
Probab=7.51  E-value=76  Score=13.58  Aligned_cols=17  Identities=35%  Similarity=0.509  Sum_probs=13.2

Q ss_pred             HHHHHHHHHHHHHHHHH
Q ss_conf             86665531105776513
Q 537021.9.peg.5   11 DRALDMTGYVPSHLLRG   27 (38)
Q Consensus        11 draldmtgyvpshllrg   27 (38)
                      ++|+.-+|-||+|++.=
T Consensus         9 e~Aik~sGIv~eH~~~~   25 (509)
T d1k8ta_           9 EKALKASGLVPEHADAF   25 (509)
T ss_dssp             HHHHHHHCCCHHHHHHH
T ss_pred             HHHHHCCCCCHHHHHHH
T ss_conf             45654049988999999


No 6  
>d1efaa1 a.35.1.5 (A:2-60) Lac repressor (LacR), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=4.81  E-value=1.2e+02  Score=12.67  Aligned_cols=19  Identities=16%  Similarity=0.468  Sum_probs=13.2

Q ss_pred             HHHHHHHHHHHHHHHHHHH
Q ss_conf             9986665531105776513
Q 537021.9.peg.5    9 VIDRALDMTGYVPSHLLRG   27 (38)
Q Consensus         9 vidraldmtgyvpshllrg   27 (38)
                      -|..+.+-.||+|...-|.
T Consensus        36 rI~~~a~~lgY~pn~~Ar~   54 (59)
T d1efaa1          36 KVEAAMAELNYIPNRVAQQ   54 (59)
T ss_dssp             HHHHHHHHHTCCCCHHHHH
T ss_pred             HHHHHHHHHCCCCCHHHHH
T ss_conf             9999999988986999998


No 7  
>d2hsga1 a.35.1.5 (A:2-58) Glucose-resistance amylase regulator CcpA, N-terminal domain {Bacillus megaterium [TaxId: 1404]}
Probab=4.43  E-value=1.3e+02  Score=12.40  Aligned_cols=20  Identities=25%  Similarity=0.531  Sum_probs=12.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHH
Q ss_conf             99986665531105776513
Q 537021.9.peg.5    8 GVIDRALDMTGYVPSHLLRG   27 (38)
Q Consensus         8 gvidraldmtgyvpshllrg   27 (38)
                      --|..+.+..||.|...-|.
T Consensus        34 ~rV~~aa~~lgY~pn~~A~~   53 (57)
T d2hsga1          34 KKVLETIERLGYRPNAVARG   53 (57)
T ss_dssp             HHHHHHHHHHTCCSCHHHHH
T ss_pred             HHHHHHHHHHCCCCCHHHHH
T ss_conf             99999999988697999997


No 8  
>d1qpza1 a.35.1.5 (A:2-58) Purine repressor (PurR), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=4.35  E-value=1.3e+02  Score=12.40  Aligned_cols=20  Identities=25%  Similarity=0.340  Sum_probs=13.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHH
Q ss_conf             99986665531105776513
Q 537021.9.peg.5    8 GVIDRALDMTGYVPSHLLRG   27 (38)
Q Consensus         8 gvidraldmtgyvpshllrg   27 (38)
                      .-|-.+.+..||+|...-|.
T Consensus        33 ~rV~~~a~~lgY~pn~~Ar~   52 (57)
T d1qpza1          33 NAVWAAIKELHYSPSAVARS   52 (57)
T ss_dssp             HHHHHHHHHHTCCCCHHHHH
T ss_pred             HHHHHHHHHHCCCCCHHHHH
T ss_conf             99999999988897999998


No 9  
>d1q15a1 c.26.2.1 (A:206-501) beta-Lactam synthetase {Pectobacterium carotovorum [TaxId: 554]}
Probab=4.05  E-value=1.2e+02  Score=12.54  Aligned_cols=19  Identities=16%  Similarity=0.382  Sum_probs=12.1

Q ss_pred             HHHHHHHHHHHHHHHHHHH
Q ss_conf             9999866655311057765
Q 537021.9.peg.5    7 KGVIDRALDMTGYVPSHLL   25 (38)
Q Consensus         7 kgvidraldmtgyvpshll   25 (38)
                      |-++-+|+++.+|+|...+
T Consensus       216 K~iLR~a~~~~~~LP~~i~  234 (296)
T d1q15a1         216 KNILREYADSLQLLPKDIV  234 (296)
T ss_dssp             SHHHHHHHHHTSCSCHHHH
T ss_pred             HHHHHHHHHHCCCCCHHHH
T ss_conf             7999999860798999993


No 10 
>d2pk8a1 d.274.1.1 (A:2-95) Hypothetical protein PF0899 {Pyrococcus furiosus [TaxId: 2261]}
Probab=3.81  E-value=1.2e+02  Score=12.55  Aligned_cols=25  Identities=36%  Similarity=0.616  Sum_probs=0.0

Q ss_pred             HHHHHHHH---HHHHHHHHHHHHHHHHH
Q ss_conf             99999866---65531105776513465
Q 537021.9.peg.5    6 IKGVIDRA---LDMTGYVPSHLLRGKVF   30 (38)
Q Consensus         6 ikgvidra---ldmtgyvpshllrgkvf   30 (38)
                      |-+.|+++   |.|.||-|.-+|-|+-|
T Consensus         9 iL~~ie~~inELk~dG~ePDiiL~G~e~   36 (94)
T d2pk8a1           9 ILGEIEEKMNELKMDGFNPDIILFGREA   36 (94)
T ss_dssp             HHHHHHHHHHHHHHTTCCCCEEEECHHH
T ss_pred             HHHHHHHHHHHHHHCCCCCCEEEECHHH
T ss_conf             9999999999998658998769974899


Done!