RPS-BLAST 2.2.22 [Sep-27-2009]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= 537021.9.peg.54_1
         (64 letters)



>d1s12a_ d.64.2.1 (A:) Hypothetical protein TM1457 {Thermotoga
          maritima [TaxId: 2336]}
          Length = 94

 Score = 25.1 bits (55), Expect = 1.5
 Identities = 7/48 (14%), Positives = 16/48 (33%), Gaps = 9/48 (18%)

Query: 19 LKKGLLCCKIRIWNQRSQTILKSY---------RYKQVCKIQIIQEGS 57
           + G L  K          +L +          ++    ++++I  GS
Sbjct: 47 KESGYLKVKFEELENCEVKVLAAMVRSLKELEQKFPSQIRVEVIDNGS 94


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.331    0.141    0.416 

Gapped
Lambda     K      H
   0.267   0.0649    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 218,356
Number of extensions: 7342
Number of successful extensions: 20
Number of sequences better than 10.0: 1
Number of HSP's gapped: 19
Number of HSP's successfully gapped: 3
Length of query: 64
Length of database: 2,407,596
Length adjustment: 33
Effective length of query: 31
Effective length of database: 1,954,506
Effective search space: 60589686
Effective search space used: 60589686
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (22.0 bits)
S2: 47 (22.0 bits)