RPS-BLAST 2.2.22 [Sep-27-2009]

Database: CddB 
           21,608 sequences; 5,994,473 total letters

Searching..................................................done

Query= 537021.9.peg.568_1
         (45 letters)



>gnl|CDD|181318 PRK08245, PRK08245, hypothetical protein; Validated.
          Length = 240

 Score = 24.1 bits (53), Expect = 7.9
 Identities = 5/12 (41%), Positives = 10/12 (83%)

Query: 21  VIVGDKEGIVIV 32
           +IV D +G+V++
Sbjct: 174 IIVADDDGVVVI 185


>gnl|CDD|178420 PLN02825, PLN02825, amino-acid N-acetyltransferase.
          Length = 515

 Score = 24.0 bits (52), Expect = 8.4
 Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 2/28 (7%)

Query: 18  LPSVIVGDKEGIVIVCIIISSLPFFCNK 45
           L S +V ++EG +I C  +   PFF  K
Sbjct: 406 LDSFVVVEREGSIIACAAL--FPFFEEK 431


  Database: CddB
    Posted date:  Feb 4, 2011  9:54 PM
  Number of letters in database: 5,994,473
  Number of sequences in database:  21,608
  
Lambda     K      H
   0.331    0.149    0.475 

Gapped
Lambda     K      H
   0.267   0.0592    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 21608
Number of Hits to DB: 738,253
Number of extensions: 28301
Number of successful extensions: 93
Number of sequences better than 10.0: 1
Number of HSP's gapped: 93
Number of HSP's successfully gapped: 6
Length of query: 45
Length of database: 5,994,473
Length adjustment: 18
Effective length of query: 27
Effective length of database: 5,605,529
Effective search space: 151349283
Effective search space used: 151349283
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 50 (23.3 bits)