Query 537021.9.peg.574_1
Match_columns 51
No_of_seqs 1 out of 3
Neff 1.0
Searched_HMMs 23785
Date Tue May 24 21:31:24 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i peg_574.hhm -d /home/congqian_1/database/pdb/pdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ee7_A Replicase polyprotein 1 23.8 23 0.00096 17.3 1.2 11 39-49 68-78 (121)
2 1jhd_A Sulfate adenylyltransfe 20.4 32 0.0014 16.5 1.4 22 26-47 358-379 (396)
3 3cr8_A Sulfate adenylyltranfer 14.9 49 0.002 15.5 1.2 23 25-47 328-350 (552)
4 1x6v_B Bifunctional 3'-phospho 14.1 60 0.0025 15.1 1.5 22 26-47 585-606 (630)
5 1u7l_A Vacuolar ATP synthase s 13.1 88 0.0037 14.2 2.5 35 15-49 296-330 (392)
6 1r6x_A ATP:sulfate adenylyltra 10.2 85 0.0036 14.3 1.3 22 26-47 354-375 (395)
7 2j97_A Replicase polyprotein 1 9.9 85 0.0036 14.3 1.2 11 39-49 64-74 (109)
8 1g8f_A Sulfate adenylyltransfe 9.4 1E+02 0.0042 13.9 1.4 22 26-47 355-376 (511)
9 1uw7_A NSP9; viral protein, re 9.0 89 0.0037 14.2 1.0 11 39-49 98-108 (143)
10 2gak_A Beta-1,6-N-acetylglucos 8.3 1.3E+02 0.0056 13.3 1.8 32 17-49 85-116 (391)
No 1
>3ee7_A Replicase polyprotein 1A; GXXXG, dimerization, SARS-COV, helix-helix, cytoplasm, hydrolase, membrane, metal-binding, protease; 2.60A {Sars coronavirus} PDB: 1qz8_A
Probab=23.76 E-value=23 Score=17.26 Aligned_cols=11 Identities=45% Similarity=1.050 Sum_probs=9.1
Q ss_pred CCCCCEEEEEE
Q ss_conf 69984314664
Q 537021.9.peg.5 39 GLRPPCIFCIH 49 (51)
Q Consensus 39 glrppcifcih 49 (51)
.|.|||-|++.
T Consensus 68 ELePPckF~v~ 78 (121)
T 3ee7_A 68 ELEPPCRFVTD 78 (121)
T ss_dssp EBCCCEEEEEC
T ss_pred ECCCCCEEEEE
T ss_conf 21898399998
No 2
>1jhd_A Sulfate adenylyltransferase; sulfurylase, APS, chemoautotroph, bromide; 1.70A {Sulfur-oxidizing endosymbiont ofriftia pachyptila} SCOP: b.122.1.3 c.26.1.5
Probab=20.41 E-value=32 Score=16.48 Aligned_cols=22 Identities=36% Similarity=0.498 Sum_probs=18.7
Q ss_pred CCCCHHHHHHHHCCCCCCEEEE
Q ss_conf 0141889999960699843146
Q 537021.9.peg.5 26 KISMPFVHSMLRAGLRPPCIFC 47 (51)
Q Consensus 26 kismpfvhsmlraglrppcifc 47 (51)
.||-..+..||++|..||..|-
T Consensus 358 ~iSGt~~r~~l~~g~~pP~~f~ 379 (396)
T 1jhd_A 358 LLSGTKVREMLGQGIAPPPEFS 379 (396)
T ss_dssp CCCHHHHHHHHHTTCCCCTTTC
T ss_pred EECHHHHHHHHHCCCCCCCCCC
T ss_conf 7458999999988388897665
No 3
>3cr8_A Sulfate adenylyltranferase, adenylylsulfate kinase; APS kinase, transferase, sulfate metabolism, nucleotide 2 kinase; 2.95A {Thiobacillus denitrificans}
Probab=14.85 E-value=49 Score=15.55 Aligned_cols=23 Identities=26% Similarity=0.336 Sum_probs=19.1
Q ss_pred CCCCCHHHHHHHHCCCCCCEEEE
Q ss_conf 20141889999960699843146
Q 537021.9.peg.5 25 KKISMPFVHSMLRAGLRPPCIFC 47 (51)
Q Consensus 25 kkismpfvhsmlraglrppcifc 47 (51)
.++|...+-.||++|..||-.|-
T Consensus 328 ~~iSgt~lR~~L~~G~~pP~~f~ 350 (552)
T 3cr8_A 328 LTLSGEEFQRRMRAGLKIPEWYS 350 (552)
T ss_dssp ECCCHHHHHHHHTTTCCCCTTTS
T ss_pred ECCCHHHHHHHHHCCCCCCCHHC
T ss_conf 55688999999976999991202
No 4
>1x6v_B Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthethase 1; transferase, ATP sulfurylase, APS kinase, PAPS; HET: ADP; 1.75A {Homo sapiens} SCOP: b.122.1.3 c.26.1.5 c.37.1.4 PDB: 1xjq_B* 1xnj_B* 2qjf_A* 2ofx_A* 2ofw_A*
Probab=14.13 E-value=60 Score=15.09 Aligned_cols=22 Identities=32% Similarity=0.401 Sum_probs=18.4
Q ss_pred CCCCHHHHHHHHCCCCCCEEEE
Q ss_conf 0141889999960699843146
Q 537021.9.peg.5 26 KISMPFVHSMLRAGLRPPCIFC 47 (51)
Q Consensus 26 kismpfvhsmlraglrppcifc 47 (51)
.||...+-.||++|..||-.|-
T Consensus 585 ~iSGt~lR~~L~~G~~pP~~f~ 606 (630)
T 1x6v_B 585 FISGTRMRKLAREGQKPPEGFM 606 (630)
T ss_dssp CCCHHHHHHHHHTTCCCCTTSS
T ss_pred CCCHHHHHHHHHCCCCCCCCCC
T ss_conf 4579999999978599995508
No 5
>1u7l_A Vacuolar ATP synthase subunit C; hydrolase, structural protein; HET: TLA; 1.75A {Saccharomyces cerevisiae} SCOP: e.57.1.1
Probab=13.07 E-value=88 Score=14.21 Aligned_cols=35 Identities=29% Similarity=0.368 Sum_probs=23.6
Q ss_pred HHHHHHEEHHCCCCCHHHHHHHHCCCCCCEEEEEE
Q ss_conf 04164123102014188999996069984314664
Q 537021.9.peg.5 15 FIPIIIIVLSKKISMPFVHSMLRAGLRPPCIFCIH 49 (51)
Q Consensus 15 fipiiiivlskkismpfvhsmlraglrppcifcih 49 (51)
|--+.+.-..-|.---||.|.||-||-|....++-
T Consensus 296 fse~f~~wiHikalRvFVESVLRYGLP~~F~a~li 330 (392)
T 1u7l_A 296 YVDVFINWFHIKALRVYVESVLRYGLPPHFNIKII 330 (392)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCSSCCEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
T ss_conf 99999999999778644322342579945148999
No 6
>1r6x_A ATP:sulfate adenylyltransferase; APS kinase-like domain; 1.40A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5
Probab=10.18 E-value=85 Score=14.28 Aligned_cols=22 Identities=32% Similarity=0.288 Sum_probs=18.5
Q ss_pred CCCCHHHHHHHHCCCCCCEEEE
Q ss_conf 0141889999960699843146
Q 537021.9.peg.5 26 KISMPFVHSMLRAGLRPPCIFC 47 (51)
Q Consensus 26 kismpfvhsmlraglrppcifc 47 (51)
.||...+-.||++|..||-.|-
T Consensus 354 ~iSGt~ir~~L~~G~~~P~~f~ 375 (395)
T 1r6x_A 354 NISGTELRRRLRVGGEIPEWFS 375 (395)
T ss_dssp CCCHHHHHHHHHHTCCCCTTTS
T ss_pred EECHHHHHHHHHCCCCCCCCCC
T ss_conf 3269999999977888893408
No 7
>2j97_A Replicase polyprotein 1AB; SSB, zinc, HCOV, membrane, helicase, SARS COV, viral replicase, RNA replication, ATP-binding; 1.75A {Human coronavirus 229E} PDB: 2j98_A 2j98_B
Probab=9.87 E-value=85 Score=14.29 Aligned_cols=11 Identities=55% Similarity=1.189 Sum_probs=8.4
Q ss_pred CCCCCEEEEEE
Q ss_conf 69984314664
Q 537021.9.peg.5 39 GLRPPCIFCIH 49 (51)
Q Consensus 39 glrppcifcih 49 (51)
.|.|||-|-+.
T Consensus 64 ELePPckF~v~ 74 (109)
T 2j97_A 64 ELEPPCRFVID 74 (109)
T ss_dssp EBCCCEEEEEC
T ss_pred ECCCCCEEEEE
T ss_conf 70898499898
No 8
>1g8f_A Sulfate adenylyltransferase; alpha-beta protein, beta-barrel, rossmann-fold, kinase fold; 1.95A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1g8g_A* 1g8h_A* 1j70_A 1jec_A 1jed_A* 1jee_A*
Probab=9.35 E-value=1e+02 Score=13.91 Aligned_cols=22 Identities=32% Similarity=0.288 Sum_probs=18.4
Q ss_pred CCCCHHHHHHHHCCCCCCEEEE
Q ss_conf 0141889999960699843146
Q 537021.9.peg.5 26 KISMPFVHSMLRAGLRPPCIFC 47 (51)
Q Consensus 26 kismpfvhsmlraglrppcifc 47 (51)
.||...+-.+|++|..||-.|-
T Consensus 355 ~iSGtelr~~L~~G~~iP~~f~ 376 (511)
T 1g8f_A 355 NISGTELRRRLRVGGEIPEWFS 376 (511)
T ss_dssp CCCHHHHHHHHHHTCCCCTTTS
T ss_pred EECHHHHHHHHHCCCCCCCCCC
T ss_conf 0079999999977698894418
No 9
>1uw7_A NSP9; viral protein, replicase protein, RNA-binding; 2.8A {Sars coronavirus hku-39849} SCOP: b.140.1.1
Probab=8.99 E-value=89 Score=14.19 Aligned_cols=11 Identities=45% Similarity=1.050 Sum_probs=8.6
Q ss_pred CCCCCEEEEEE
Q ss_conf 69984314664
Q 537021.9.peg.5 39 GLRPPCIFCIH 49 (51)
Q Consensus 39 glrppcifcih 49 (51)
.|.|||-|-+.
T Consensus 98 ELePPckF~v~ 108 (143)
T 1uw7_A 98 ELEPPCRFVTD 108 (143)
T ss_dssp EBCCCCEEEEC
T ss_pred ECCCCCEEEEE
T ss_conf 12898498898
No 10
>2gak_A Beta-1,6-N-acetylglucosaminyltransferase; glycoprotein, CIS-peptide, dimer; HET: NAG; 2.00A {Mus musculus} PDB: 2gam_A*
Probab=8.31 E-value=1.3e+02 Score=13.28 Aligned_cols=32 Identities=28% Similarity=0.625 Sum_probs=0.0
Q ss_pred HHHHEEHHCCCCCHHHHHHHHCCCCCCEEEEEE
Q ss_conf 164123102014188999996069984314664
Q 537021.9.peg.5 17 PIIIIVLSKKISMPFVHSMLRAGLRPPCIFCIH 49 (51)
Q Consensus 17 piiiivlskkismpfvhsmlraglrppcifcih 49 (51)
||--+.+..+ ...++.-+|++=-+|--+||||
T Consensus 85 piAy~i~vh~-~~~~~erLl~~iy~p~N~yciH 116 (391)
T 2gak_A 85 PIAYSIVVHH-KIEMLDRLLRAIYMPQNFYCIH 116 (391)
T ss_dssp CEEEEEEECS-CHHHHHHHHHHHCCTTSEEEEE
T ss_pred CEEEEEEECC-CHHHHHHHHHHHCCCCCEEEEE
T ss_conf 7289999549-9999999999862799779999
Done!