RPS-BLAST 2.2.22 [Sep-27-2009]

Database: CddB 
           21,608 sequences; 5,994,473 total letters

Searching..................................................done

Query= 537021.9.peg.574_1
         (51 letters)



>gnl|CDD|179751 PRK04149, sat, sulfate adenylyltransferase; Reviewed.
          Length = 391

 Score = 27.5 bits (62), Expect = 0.68
 Identities = 9/21 (42%), Positives = 11/21 (52%)

Query: 26  KISMPFVHSMLRAGLRPPCIF 46
            +S   V  MLR G +PP  F
Sbjct: 348 HLSGTKVREMLREGEKPPPEF 368


>gnl|CDD|181716 PRK09236, PRK09236, dihydroorotase; Reviewed.
          Length = 444

 Score = 25.2 bits (56), Expect = 3.9
 Identities = 9/18 (50%), Positives = 11/18 (61%)

Query: 2   KYKEKYGKNRNISFIPII 19
           KYKEKYG +      P+I
Sbjct: 191 KYKEKYGDDIPAEMHPLI 208


  Database: CddB
    Posted date:  Feb 4, 2011  9:54 PM
  Number of letters in database: 5,994,473
  Number of sequences in database:  21,608
  
Lambda     K      H
   0.334    0.148    0.465 

Gapped
Lambda     K      H
   0.267   0.0755    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 21608
Number of Hits to DB: 837,181
Number of extensions: 34949
Number of successful extensions: 183
Number of sequences better than 10.0: 1
Number of HSP's gapped: 183
Number of HSP's successfully gapped: 8
Length of query: 51
Length of database: 5,994,473
Length adjustment: 24
Effective length of query: 27
Effective length of database: 5,475,881
Effective search space: 147848787
Effective search space used: 147848787
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.6 bits)
S2: 50 (23.0 bits)