RPS-BLAST 2.2.22 [Sep-27-2009] Database: mmdb70 33,805 sequences; 4,956,049 total letters Searching..................................................done Query= 537021.9.peg.582_1 (37 letters) >1jr8_A ERV2 protein, mitochondrial; FAD, sulfhydryl oxidase, helical bundle, CXXC, oxidoreductase; HET: FAD; 1.50A {Saccharomyces cerevisiae} (A:) Length = 117 Score = 24.1 bits (52), Expect = 7.7 Identities = 4/31 (12%), Positives = 9/31 (29%) Query: 1 MLRLHQIIKHFILFQEKNAHFNQYISFSQDK 31 + + E + HF + I + Sbjct: 38 LHTFIGLYAELYPCGECSYHFVKLIEKYPVQ 68 Database: mmdb70 Posted date: Jun 20, 2010 3:12 AM Number of letters in database: 4,956,049 Number of sequences in database: 33,805 Lambda K H 0.331 0.142 0.410 Gapped Lambda K H 0.267 0.0611 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 33805 Number of Hits to DB: 266,159 Number of extensions: 5976 Number of successful extensions: 27 Number of sequences better than 10.0: 1 Number of HSP's gapped: 27 Number of HSP's successfully gapped: 1 Length of query: 37 Length of database: 4,956,049 Length adjustment: 10 Effective length of query: 27 Effective length of database: 4,617,999 Effective search space: 124685973 Effective search space used: 124685973 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.9 bits) S2: 50 (23.3 bits)