RPS-BLAST 2.2.22 [Sep-27-2009]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= 537021.9.peg.598_1
         (38 letters)



>d1rz4a2 a.118.1.18 (A:2-131) Eukaryotic translation initiation
          factor 3 subunit 12, eIF3k, N-terminal domain {Human
          (Homo sapiens) [TaxId: 9606]}
          Length = 130

 Score = 23.9 bits (52), Expect = 3.9
 Identities = 10/20 (50%), Positives = 11/20 (55%)

Query: 1  LLNSAAHDNPENLSMTENYV 20
          LL      NPENL+  E YV
Sbjct: 13 LLKGIDRYNPENLATLERYV 32


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.314    0.131    0.374 

Gapped
Lambda     K      H
   0.267   0.0662    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 139,761
Number of extensions: 3218
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 38
Length of database: 2,407,596
Length adjustment: 11
Effective length of query: 27
Effective length of database: 2,256,566
Effective search space: 60927282
Effective search space used: 60927282
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 47 (22.0 bits)