RPS-BLAST 2.2.22 [Sep-27-2009]

Database: CddA 
           21,609 sequences; 6,263,737 total letters

Searching..................................................done

Query= 537021.9.peg.603_1
         (37 letters)



>gnl|CDD|34553 COG4945, COG4945, Membrane-anchored protein predicted to be
           involved in regulation of amylopullulanase [Carbohydrate
           transport and metabolism].
          Length = 570

 Score = 23.8 bits (51), Expect = 10.0
 Identities = 7/22 (31%), Positives = 10/22 (45%)

Query: 13  IKLRGWQYGEEFMLRTYSGESL 34
           I + GW    + +  TYS   L
Sbjct: 106 IYISGWATYVQTLTGTYSNGIL 127


  Database: CddA
    Posted date:  Feb 4, 2011  9:38 PM
  Number of letters in database: 6,263,737
  Number of sequences in database:  21,609
  
Lambda     K      H
   0.321    0.138    0.414 

Gapped
Lambda     K      H
   0.267   0.0543    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 21609
Number of Hits to DB: 449,382
Number of extensions: 10814
Number of successful extensions: 16
Number of sequences better than 10.0: 1
Number of HSP's gapped: 16
Number of HSP's successfully gapped: 1
Length of query: 37
Length of database: 6,263,737
Length adjustment: 11
Effective length of query: 26
Effective length of database: 6,026,038
Effective search space: 156676988
Effective search space used: 156676988
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (23.8 bits)