RPS-BLAST 2.2.22 [Sep-27-2009] Database: CddA 21,609 sequences; 6,263,737 total letters Searching..................................................done Query= 537021.9.peg.658_1 (40 letters) >gnl|CDD|38941 KOG3737, KOG3737, KOG3737, Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]. Length = 603 Score = 24.6 bits (53), Expect = 6.2 Identities = 6/14 (42%), Positives = 9/14 (64%) Query: 17 FLDNIAYHIKEKYP 30 F++ IAY + YP Sbjct: 460 FMEEIAYDVTSHYP 473 >gnl|CDD|36749 KOG1536, KOG1536, KOG1536, Biotin holocarboxylase synthetase/biotin-protein ligase [Coenzyme transport and metabolism]. Length = 649 Score = 24.2 bits (52), Expect = 7.1 Identities = 9/26 (34%), Positives = 10/26 (38%) Query: 4 AFFFGGFTVYKKDFLDNIAYHIKEKY 29 A F F Y K F+D I Y Sbjct: 557 AAVFNKFEKYFKLFMDQGPKSILPLY 582 Database: CddA Posted date: Feb 4, 2011 9:38 PM Number of letters in database: 6,263,737 Number of sequences in database: 21,609 Lambda K H 0.328 0.146 0.455 Gapped Lambda K H 0.267 0.0738 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 21609 Number of Hits to DB: 540,032 Number of extensions: 16401 Number of successful extensions: 63 Number of sequences better than 10.0: 1 Number of HSP's gapped: 62 Number of HSP's successfully gapped: 6 Length of query: 40 Length of database: 6,263,737 Length adjustment: 14 Effective length of query: 26 Effective length of database: 5,961,211 Effective search space: 154991486 Effective search space used: 154991486 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.7 bits) S2: 51 (23.4 bits)