Query 537021.9.peg.691_1
Match_columns 46
No_of_seqs 1 out of 3
Neff 1.0
Searched_HMMs 13730
Date Tue May 24 23:44:02 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i peg_691.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2axth1 f.23.33.1 (H:2-65) Pho 46.3 6.9 0.0005 18.2 2.8 22 17-38 35-56 (64)
2 d1xlya_ a.232.1.1 (A:) RNA-bin 32.4 6.6 0.00048 18.3 0.9 23 14-36 14-36 (232)
3 d2axti1 f.23.37.1 (I:1-35) Pho 9.9 62 0.0045 13.4 2.1 23 18-40 11-33 (35)
4 d1tdpa_ a.29.8.1 (A:) Carnobac 8.9 46 0.0033 14.0 0.7 22 15-36 50-71 (111)
5 d1vf6a_ a.194.1.1 (A:) Associa 6.9 85 0.0062 12.7 1.5 13 13-25 30-42 (58)
6 d1zkda1 c.66.1.52 (A:2-366) Hy 5.9 98 0.0071 12.4 1.5 21 10-30 51-71 (365)
7 d1d9ca_ a.26.1.3 (A:) Interfer 5.8 98 0.0072 12.4 2.5 26 17-43 44-69 (121)
8 d1dkua2 c.61.1.2 (A:167-315) P 5.4 1E+02 0.0075 12.3 1.1 18 7-24 120-137 (149)
9 d1j5ua_ d.208.1.1 (A:) Hypothe 5.1 56 0.0041 13.6 -0.4 17 14-30 55-71 (127)
10 d1jw3a_ d.208.1.1 (A:) Hypothe 3.2 1E+02 0.0076 12.2 -0.4 13 5-17 115-127 (140)
No 1
>d2axth1 f.23.33.1 (H:2-65) Photosystem II reaction center protein H, PsbH {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=46.28 E-value=6.9 Score=18.21 Aligned_cols=22 Identities=36% Similarity=0.563 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 6899999999974415666568
Q 537021.9.peg.6 17 PLFSRFISIYLLIFNSAIPIKN 38 (46)
Q Consensus 17 plfsrfisiyllifnsaipikn 38 (46)
-||.-|..|.|-|+||.+.+.+
T Consensus 35 ~Lf~vfl~iiLeiYNss~lldg 56 (64)
T d2axth1 35 GLFLVFLLIILEIYNSTLILDG 56 (64)
T ss_dssp HHHHHHHHHHHHHHTTSSCCTT
T ss_pred HHHHHHHHHHHHHHCCCEEECC
T ss_conf 9999999999999464215426
No 2
>d1xlya_ a.232.1.1 (A:) RNA-binding protein She2p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=32.37 E-value=6.6 Score=18.28 Aligned_cols=23 Identities=35% Similarity=0.597 Sum_probs=18.4
Q ss_pred EECHHHHHHHHHHHHHHCCCCCC
Q ss_conf 30168999999999744156665
Q 537021.9.peg.6 14 SISPLFSRFISIYLLIFNSAIPI 36 (46)
Q Consensus 14 sisplfsrfisiyllifnsaipi 36 (46)
.|.++||++||-|.-+.|.-|.+
T Consensus 14 qi~~~~s~YiS~yv~~LNk~I~~ 36 (232)
T d1xlya_ 14 QILALLSRYLSSYIHVLNKFISH 36 (232)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999
No 3
>d2axti1 f.23.37.1 (I:1-35) Photosystem II reaction center protein I, PsbI {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=9.87 E-value=62 Score=13.37 Aligned_cols=23 Identities=26% Similarity=0.538 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 89999999997441566656887
Q 537021.9.peg.6 18 LFSRFISIYLLIFNSAIPIKNPI 40 (46)
Q Consensus 18 lfsrfisiyllifnsaipiknpi 40 (46)
...-|+|++..-|-|.-|-.||-
T Consensus 11 vV~fFv~lFiFGFLSnDP~RnP~ 33 (35)
T d2axti1 11 VVTFFVLLFVFGFLSGDPARNPK 33 (35)
T ss_dssp HHHHHHHHHHHHHHTTCTTCSSC
T ss_pred HHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 89999999998630589988989
No 4
>d1tdpa_ a.29.8.1 (A:) Carnobacteriocin B2 immunity protein {Carnobacterium piscicola [TaxId: 2751]}
Probab=8.89 E-value=46 Score=14.04 Aligned_cols=22 Identities=41% Similarity=0.505 Sum_probs=17.4
Q ss_pred ECHHHHHHHHHHHHHHCCCCCC
Q ss_conf 0168999999999744156665
Q 537021.9.peg.6 15 ISPLFSRFISIYLLIFNSAIPI 36 (46)
Q Consensus 15 isplfsrfisiyllifnsaipi 36 (46)
.-.+.||-||-|.||...+||-
T Consensus 50 vvt~LS~~ISkYYL~H~~~iP~ 71 (111)
T d1tdpa_ 50 VISLLSRGISSYYLSHKRIIPS 71 (111)
T ss_dssp HHHHHHHHHHHTCTTSCCCCCG
T ss_pred HHHHHHCCHHHHHHHHCCCCCH
T ss_conf 9999831247788774011859
No 5
>d1vf6a_ a.194.1.1 (A:) Associated tight junction protein Pals-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.94 E-value=85 Score=12.69 Aligned_cols=13 Identities=31% Similarity=0.680 Sum_probs=8.9
Q ss_pred EEECHHHHHHHHH
Q ss_conf 1301689999999
Q 537021.9.peg.6 13 ISISPLFSRFISI 25 (46)
Q Consensus 13 isisplfsrfisi 25 (46)
.--||||+...+.
T Consensus 30 ~LqSPLF~qiL~l 42 (58)
T d1vf6a_ 30 TLKSPLFNQILTL 42 (58)
T ss_dssp HHHCHHHHHHHHH
T ss_pred HHHCHHHHHHHHH
T ss_conf 9868789999999
No 6
>d1zkda1 c.66.1.52 (A:2-366) Hypothetical protein RPA4359 {Rhodopseudomonas palustris [TaxId: 1076]}
Probab=5.88 E-value=98 Score=12.38 Aligned_cols=21 Identities=14% Similarity=0.319 Sum_probs=16.0
Q ss_pred EECEEECHHHHHHHHHHHHHH
Q ss_conf 312130168999999999744
Q 537021.9.peg.6 10 YHNISISPLFSRFISIYLLIF 30 (46)
Q Consensus 10 yhnisisplfsrfisiyllif 30 (46)
|..-++||+|...|+.+++-.
T Consensus 51 ~Tsp~is~~Fg~~ia~~~~~~ 71 (365)
T d1zkda1 51 TTSPEISQMFGELLGLWSASV 71 (365)
T ss_dssp CSHHHHCHHHHHHHHHHHHHH
T ss_pred ECCCCHHHHHHHHHHHHHHHH
T ss_conf 788734799999999999999
No 7
>d1d9ca_ a.26.1.3 (A:) Interferon-gamma {Cow (Bos taurus) [TaxId: 9913]}
Probab=5.83 E-value=98 Score=12.36 Aligned_cols=26 Identities=23% Similarity=0.415 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCHH
Q ss_conf 689999999997441566656887200
Q 537021.9.peg.6 17 PLFSRFISIYLLIFNSAIPIKNPIPQS 43 (46)
Q Consensus 17 plfsrfisiyllifnsaipiknpipqs 43 (46)
-+.|+.+|+|+-+|. +.+---++..|
T Consensus 44 IilSqIvs~Y~kife-nl~~~~~~~~s 69 (121)
T d1d9ca_ 44 IIQSQIVSFYFKLFE-NLKDNQVIQRS 69 (121)
T ss_dssp HHHHHHHHHHHHHHH-TTTTCTTTHHH
T ss_pred HHHHHHHHHHHHHHH-HCCCCCHHHHH
T ss_conf 999999999999998-17566015756
No 8
>d1dkua2 c.61.1.2 (A:167-315) Phosphoribosylpyrophosphate synthetase {Bacillus subtilis [TaxId: 1423]}
Probab=5.38 E-value=1e+02 Score=12.26 Aligned_cols=18 Identities=28% Similarity=0.674 Sum_probs=13.4
Q ss_pred EEEEECEEECHHHHHHHH
Q ss_conf 633312130168999999
Q 537021.9.peg.6 7 VETYHNISISPLFSRFIS 24 (46)
Q Consensus 7 vetyhnisisplfsrfis 24 (46)
.+.++-+|++|+|.+-|.
T Consensus 120 ~~ki~vi~va~llA~aI~ 137 (149)
T d1dkua2 120 IERFKQLSVGPLLAEAII 137 (149)
T ss_dssp CSSEEEECCHHHHHHHHH
T ss_pred CCCCEEEEHHHHHHHHHH
T ss_conf 688089875999999999
No 9
>d1j5ua_ d.208.1.1 (A:) Hypothetical protein TM1083 {Thermotoga maritima [TaxId: 2336]}
Probab=5.11 E-value=56 Score=13.59 Aligned_cols=17 Identities=12% Similarity=0.178 Sum_probs=7.3
Q ss_pred EECHHHHHHHHHHHHHH
Q ss_conf 30168999999999744
Q 537021.9.peg.6 14 SISPLFSRFISIYLLIF 30 (46)
Q Consensus 14 sisplfsrfisiyllif 30 (46)
+..-|+-+|++-.|..|
T Consensus 55 d~e~LL~~~L~Ell~l~ 71 (127)
T d1j5ua_ 55 ETEDAFFDTVNDWILEI 71 (127)
T ss_dssp CSHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHH
T ss_conf 97999999999999986
No 10
>d1jw3a_ d.208.1.1 (A:) Hypothetical protein MTH1598 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=3.18 E-value=1e+02 Score=12.24 Aligned_cols=13 Identities=38% Similarity=0.516 Sum_probs=0.0
Q ss_pred EEEEEEECEEECH
Q ss_conf 8863331213016
Q 537021.9.peg.6 5 VKVETYHNISISP 17 (46)
Q Consensus 5 vkvetyhnisisp 17 (46)
||.-|||+..+.+
T Consensus 115 VKAvTyh~l~v~~ 127 (140)
T d1jw3a_ 115 VKAVTFHMMEILD 127 (140)
T ss_dssp CCBCCSCCCEEEE
T ss_pred EEEEECCCEEEEE
T ss_conf 6962355479998
Done!