HHsearch alignment of GI: peg_74 and MMDB domain: 1syy_A_

>1syy_A (A:) Ribonucleoside-diphosphate reductase beta chain; DIIRON, oxygen activation, iron coupled radical, immune evasion, replication; 1.70A {Chlamydia trachomatis}
Probab=100.00  E-value=2.7e-36  Score=258.63  Aligned_cols=182  Identities=52%  Similarity=0.944  Sum_probs=168.6

Q ss_pred             HCCCCCCCCCCCCCCCCCC-CHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             3067667832022427766-822008762789999999998504983346734616852040148989999999999999
Q 537021.9.peg.7   11 QAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFF   89 (196)
Q Consensus        11 ~~~~~~~~~~~~~ii~~~~-~~~~l~PikY~~~~~~yk~~~~~fW~peEI~l~~D~~dw~~~~~Lt~~Er~~~~~iL~ff   89 (196)
                      -....+.+.++++|++|++ +.++++|++|||+|++|+++.++||+|+||++++|+.||++ .+||+.||+++.++|++|
T Consensus         7 ~~~~~~~~~~~~~i~~~~~~~~~~~~p~~y~~~~~ly~~~~~~~W~peei~~~~D~~d~~~-~~L~~~er~~~~~~l~~~   85 (346)
T 1syy_A            7 DGKQKRVNLNSKRLVNCNQVDVNQLVPIKYKWAWEHYLNGCANNWLPTEIPMGKDIELWKS-DRLSEDERRVILLNLGFF   85 (346)
T ss_dssp             GGGGGSCCGGGCCSSSCCSSCTTCCCSCCCHHHHHHHHHHHHTCCCGGGSCCHHHHHHHHS-SCSCHHHHHHHHHHHHHH
T ss_pred             HCCCCCCCCCCCEEECCCCCCHHHCCCCCCHHHHHHHHHHHHCCCCCHHCCCCCCHHHHHH-CCCCHHHHHHHHHHHHHH
T ss_conf             1544556612141258998865451898777999999999976999400276134988854-899999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH
Q ss_conf             77636777777888876528689999999999999999999999999823763689999950999999999999999853
Q 537021.9.peg.7   90 ASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL  169 (196)
Q Consensus        90 s~~D~~v~~nl~~~i~~~i~~pE~~~~~~~q~~~E~iHs~sYs~il~tl~~d~~eif~~~~~~p~i~~K~~~~~k~~~~i  169 (196)
                      +.+|++|++++...+++.++.||+++|+++|+++|++|+++|++++++++.+++++|+++.++|++++|++|+.++++..
T Consensus        86 ~~~d~~v~~~l~~~l~~~~~~~e~~~~~~~q~~~E~~H~~~Y~~il~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  165 (346)
T 1syy_A           86 STAESLVGNNIVLAIFKHVTNPEARQYLLRQAFEEAVHTHTFLYICESLGLDEKEIFNAYNERAAIKAKDDFQMEITGKV  165 (346)
T ss_dssp             HHHHHHHHHHHHHTHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHTTHHHHCHHHHHHHHHHHHTTSGG
T ss_pred             HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             98999998888998872178599999999999998889999999999846678999999830899999999999866410


Q ss_pred             HCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             011334479334899999999996
Q 537021.9.peg.7  170 SSPSFHYWNKRRRSRILTRSLRFL  193 (196)
Q Consensus       170 ~~~~~~~~~~e~~~~~l~~li~f~  193 (196)
                      .+......+.+..+.++..+++|.
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~l~~~  189 (346)
T 1syy_A          166 LDPNFRTDSVEGLQEFVKNLVGYY  189 (346)
T ss_dssp             GSTTCCSSSHHHHHHHHHHHHHHH
T ss_pred             HCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf             033312144455899999999999